Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1980 ATGGTCAGCATCCAATCTTCCTACACTGTCACCCCTTTCGAGCCAACCCCAACCGACAAACTCTTCTCCCTCTGCGAGCAAATCAAGCTTCGCACTCACGCTCCCCTTCTCTATGTTTACAAGTCCCAACACCATGATAATGATCCGATCACATCATCATCATCATCATCACCATCATCATCATCATCAACAACCTTCAACCTTGCCGTTCGGACCCTGAAGGACTCTCTCAGCAAAGCCTTGTCCATATACTACCCTCTTGCGGGAAGGTTGAGTTGGATCGAAGGTTCCAGATGGGAACTCCACTGCAACGCAAAAGGTGCGACGCTATTGGAAGCGAGTTGCGAAGGGGCGTGTTTGGATGATCTTGGTGATTTCGTCCCAACCCAGTTGGTATCACAGCTCATACCAAACATCGATTATTACGGTTCCTCCATTGAGGACGTGCCATTGTTGGCGGTGCAAGTAACTGGGTTCCGATGTGGGGGTTTTACCATTGGCGTTGCCTTGTGTCGTGCTTCGATTGATGGAACAGCAACAATGCGGTTCATGAACACGTGGGCTAAGTTGGCCAGAGGAGACCCTTTGGATTCAAAAGAAGATTTTCCAAACCATGATCGAACTTTGTTAGATTCACGCAGGTTAAATGATCATTCCGGGTCGTTGCATCGTCATCATTCTGAGTTTTGCAGCCCTCCTCCTTGGTTAGGGAAATTGGAAGGAGACACAAGAGTTGTTGTTTCAGTTGTGAAACTCACGAGGGAACAAGTCAAGAGGCTCAGGATGAAAGCCATGATGATTAATGATAATTCTCTCGATCCAGTTAGGCCTTGCTCAACTTTTGAGGTCATTACTGGGCACTTGTGGAGGAGTGTGAGCAAAGCACGCTACGAGGGAAATGTTGACCAACCAACAAGGTTGTCCACTTTGGTTAATTGCAGGAACCGATTGAGGCCACCCCTTCCTGCTGGTTATGCAGGTAATGCGGCGTTCCCCACAGTGACACCAACCTGCTCCTTTGGTGACCTTATGCACAAGCCTCTAAGTTTTGCAGCTGGGAAAGTGAAGGGAGCAATTGAGAGGCTGGATGATGGGTACGTGAGGTCTTCTCTTGATCACATTGCTAGTGAGAAGGACATGGATTTGGTGAGGTATAACTTTCACTACCCTGCAAAGAGTGTTCATGAGGGTCCTTCCAATGGGAACCCGAACCTGTTTGTTGTTAGTTGGATGAATTTCTCGTACAAGGATGCGGATTTTGGGTGGGGGGAACCTGTATATTTTGGACCAGGGTACATGGATTCTGAAGGGAAGGCATTCATCATGAACAAAGCTAATGGTGATGGACTCATTGTTGCCATTTGTTTAGAGTCAAGGCACATGGATGCTTTCAAGAAATTTTTTTATGAGGATATTGAGGAGGTATTTGCTACTTCCAAATTGTGA 1446 0.4703 MVSIQSSYTVTPFEPTPTDKLFSLCEQIKLRTHAPLLYVYKSQHHDNDPITSSSSSSPSSSSSTTFNLAVRTLKDSLSKALSIYYPLAGRLSWIEGSRWELHCNAKGATLLEASCEGACLDDLGDFVPTQLVSQLIPNIDYYGSSIEDVPLLAVQVTGFRCGGFTIGVALCRASIDGTATMRFMNTWAKLARGDPLDSKEDFPNHDRTLLDSRRLNDHSGSLHRHHSEFCSPPPWLGKLEGDTRVVVSVVKLTREQVKRLRMKAMMINDNSLDPVRPCSTFEVITGHLWRSVSKARYEGNVDQPTRLSTLVNCRNRLRPPLPAGYAGNAAFPTVTPTCSFGDLMHKPLSFAAGKVKGAIERLDDGYVRSSLDHIASEKDMDLVRYNFHYPAKSVHEGPSNGNPNLFVVSWMNFSYKDADFGWGEPVYFGPGYMDSEGKAFIMNKANGDGLIVAICLESRHMDAFKKFFYEDIEEVFATSKL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1980 481 Gene3D - 1 230 IPR023213 -
Dod01g1980 481 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 477 - -
Dod01g1980 481 Pfam Transferase family 1 470 - -
Dod01g1980 481 Gene3D - 238 471 IPR023213 -
Dod01g1980 481 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1980 Dod-Chr1 55441791 55444368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1980 2 470 Monolignol Biosynthesis Gene Families AT5G48930 37.185 5.29e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1980 K13065 - gmx:100775549 622.854