Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1979 ATGAATTCCCCACTAGGCAATAACGCATTTGTGTTCAACGTTACGAGAAATTCCGACAGCACGATTAAGGCTTGTTTCGTTAAGCCTCTATATGCTAGCAGTGAGGGCCTCTGGTCAGACAATTCATTGCATTCAAGCGTGCCTCCATTCGCTCTGCAACTTGGAATCCTTCTGTCAGTCAATCGCATCTTTCTCGTTATATCAGAATCATACCACATACCTCGTACCGTTGCCAACATTCTCGCTGGTTTTTTGATAGGTCCATCTGTTCTTGGATCATGGAACACCTTTTGCAAATACGTATACCCTCTAAAGGATGTAATCGCGATAGAGACCATCGGAGCCCTGACCCTAGTTTACTACGTGTTCTTGGTTGGGCTAGACATGGATTTGAAGCCAATAAAGACGTGCCACAACAAGAAGGCCATCGTCGTCGCCGTCACCGGGGTATTCTTCAGCTTACCAATTGGAATAGGCCTGTACTACCTCCTCCTCACAAACATGGGGACCAAACCGTTGCCTCACCAAATCTCACACATTAGGGGTGCATTGATATGGGCATTCACCCTCTCTTGCAGCGAGTTCCCCGAGATAGCGAACATCCTCTCCCAACTCAAGCTCCTCCTCACGGAGAATGGACAGCTGGCGCTAACGGCTTCCCTCTTCAGCGACGTGCTCTCCTCCATCTTCTTCTTGCTCTCCGTGACCGAATTCCACCGGGCTTCCTCGCTGTCGTTTATATGCACCGTGGCGTTCGTTCTGCTGTGTATCGCCGTGGTGCAGCCGCTTGCCAAGTGGCTACACAACAAGATTGGCGCGGGTGATGGAGTTTTGCTCGACTCGCAGGTTGTGGTCATGTTGCACGTGGTTTTGCTGTTCGGGCTCCTGAGTGATGGCTTGGGTGCGTCTTCTGTTACGGGGGCTTTTCTGTTGGGGGTTGTTATGCCGAAGGGTGTGCTCAACAATGCGATTCAGGACAAGGTGCTGGACTTTGTGGGAACGGTTTTGATGCCTGTGTTCTATACCGCTATGGGGGAGAGGATCAGGATCCAAGAGCTGGTGTCGGGTGTGAGCTGGGTAACTGTGGTTATTGTCATCTTGTTGGCCAGCTTGGCGAAGGTGTTGTCCACCTTATTGGTCACTCGGATTTACCAGATGCCGCTCAAGGATGGGTTTACACTTGGGGCGCTCATGAATACTAAAGGGCCATTGTCATTGATCATTCTCAGCATTGCCAGGGACAGAATACAACTGGATAGTCAAACCTACGGTGTGATGCTGGTGGCGTGCTGGGCAATGACGCTTCCCGTTGGGCCAGTATTAGCTTCATGGAAAAAGACACTCCTCGTAACAGGCTTGAGCCAACGCAAGACCATGCAAGGGACAAGGCCAGACTCACCACTCAGGGTCCTAGCTTGTGTCCACACGAAGATAGACGCCAACGTCATCATCAACCTCTTGAAAGCATCATCTCCGTCGGTGAAGTCCCCGATTCAAGTGGTGGCTATGGAGCTCGTGAAGATGACGGCGCAACGGTCACGCGAGGCGTCGTGCCTCATCATAAAGCCGGCGGCGGCGGCGGCCCAGAGCTCCAAAGCCGCCACGAAATCAGGGAGCTTCAAGATGACAGACAACGAGGACACCAGCAAGGACATCCTCAGCAGCTTCGACAACCTCAGCCAAGCCATCTTCGCTGAGAAGATGAGGGTTGTCTCTGTCTACAACACCATGCACAAGGACATCTTTAACTTGGCCAAACATAGAGGCGTTACCCTGATCCTAACCACGCTCTACAAGCAACCAACCTACGACGGTTTAGGCGCAGGTGCGGCCACGGCAAGAGCTGCCAACATGGTGAACAAGGACCTCGCGAGCAAAGACGAGAGGAGAATCGTCTTGGACAATCTCCTCAAGGAAACACCCTGCTGTCTCGCCGTATTCGTCGACAGGGGCTTCAACCAAAAACGCTCCAAGTCCCAAAAATTCGCCATGATCTACGTCTCTGGCGCAGACGACCGCGAGGCACTGTCGTACGCGTGGCGTATGAGCCGAAACGCAGAGGTCCACTTAACAGTGGTGAGGCTCGTATGGAACGACACGAATAGCGAGTTCGACGACGACGACGAGGAGTACATACGCCTCTTCGTGCGCCAAACGCAGGGGATGCCGTGGGTCAGGTACTTGGAGAAGGAAGTTAGGGACGAGCACGAAACGGTGTCGCTTTTGAACAAGATGGGTAGCAAAGGGTTCGATTTGTTCCTTATTGGGAGAGGGCACGGGAGGAAGATGTCGCTGGCGCAAACGACGGAGGCAGTGCTGGAGGAGCCAGCGTTGGGGCCTCTTGGTGATGCGCTTGCGGATCTGAACTCTGCGGCGGAGAGTTCGATTTTGGTGCTGCAGAGGCAGGGTGATGGCGGTGGTTTGGGAAGGAGGATGACGAGGAGGAATACGAGGACGGACAGTGAGGCGGAGGCAGAGCTGGCGCCTTGGCCAACCCATAAGTTTATCTTCTCCACCGGGTTCATGTAG 2529 0.5322 MNSPLGNNAFVFNVTRNSDSTIKACFVKPLYASSEGLWSDNSLHSSVPPFALQLGILLSVNRIFLVISESYHIPRTVANILAGFLIGPSVLGSWNTFCKYVYPLKDVIAIETIGALTLVYYVFLVGLDMDLKPIKTCHNKKAIVVAVTGVFFSLPIGIGLYYLLLTNMGTKPLPHQISHIRGALIWAFTLSCSEFPEIANILSQLKLLLTENGQLALTASLFSDVLSSIFFLLSVTEFHRASSLSFICTVAFVLLCIAVVQPLAKWLHNKIGAGDGVLLDSQVVVMLHVVLLFGLLSDGLGASSVTGAFLLGVVMPKGVLNNAIQDKVLDFVGTVLMPVFYTAMGERIRIQELVSGVSWVTVVIVILLASLAKVLSTLLVTRIYQMPLKDGFTLGALMNTKGPLSLIILSIARDRIQLDSQTYGVMLVACWAMTLPVGPVLASWKKTLLVTGLSQRKTMQGTRPDSPLRVLACVHTKIDANVIINLLKASSPSVKSPIQVVAMELVKMTAQRSREASCLIIKPAAAAAQSSKAATKSGSFKMTDNEDTSKDILSSFDNLSQAIFAEKMRVVSVYNTMHKDIFNLAKHRGVTLILTTLYKQPTYDGLGAGAATARAANMVNKDLASKDERRIVLDNLLKETPCCLAVFVDRGFNQKRSKSQKFAMIYVSGADDREALSYAWRMSRNAEVHLTVVRLVWNDTNSEFDDDDEEYIRLFVRQTQGMPWVRYLEKEVRDEHETVSLLNKMGSKGFDLFLIGRGHGRKMSLAQTTEAVLEEPALGPLGDALADLNSAAESSILVLQRQGDGGGLGRRMTRRNTRTDSEAEAELAPWPTHKFIFSTGFM* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1979 842 Gene3D - 49 449 IPR038770 -
Dod01g1979 842 Pfam Sodium/hydrogen exchanger family 63 435 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod01g1979 842 PANTHER CATION/H+ EXCHANGER 3 21 810 - -
Dod01g1979 842 PANTHER CATION/H + ANTIPORTER 21 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1979 Dod-Chr1 55424688 55429028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1979 17 801 Antiporter Super Family AT2G13620 32.317 1.70e-127 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1979 - - aprc:113862236 887.486