Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1969 ATGGAAATTCAGTTCCAGCAACCGAACCTGCAGCATCAGAAAGCAGCAACCAAAGGCAACAAGAAGATCAAAGGGAGAGGCAGGAACAGCAGCAACACAAACAAATTTGTTGGGGTGAGGCAAAGGCCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACAACACAGAAGATAAGAATGTGGCTTGGCACATTTGAGACAGCAGAAGAGGCAGCAAGAGCTTATGATGAAGCCGCATGCCTTCTTCGTGGATCCAACACTAGAACAAACTTCATCACTCATGTATCCTTGGATTCACCACTTGCTTCTAGGATCAGAAATCTGCTTAAAAACAAAAAGGGTACGAAAAAACAGGAAAATGTTGATGCATCTGCACCAAGAATCAGCACTGGTACTAGCACTAGTAGCACTAGCAGTTCTAGTAGTAATTCAACCAATAATGAAAACAATGACAACAATGAGAACTCTGTTTCAACTGTGACAACTCAAAACACACAGCAGGTTCTTGATGATGCTTATAAGCCAGACTTGAGCAACTGCAACTCGAGGGAGGAATTTGAGTCTGTTTCACAGACCAATAATTTTTCATGGGGTTCTTTTGGACATGTCTTTGATCGTTTTCCTTTTGCTCATGTATTGGATCATATGCCAAAGACTGATGATAGCCTTGCTGATACAGTTGACATGGAGCTACTAGAATTTGAAAGGATGAAGGTTGAAAGACAAATATCAGCTTCACTCTATGCAATTAATGGAGTTCAGGAGTACATGGCTGTTCAGGACTCTAATGAAGCTCTCTGGGATCTTCCACCCTTGTGCTCATTGTTTTGTTAA 834 0.4209 MEIQFQQPNLQHQKAATKGNKKIKGRGRNSSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLKNKKGTKKQENVDASAPRISTGTSTSSTSSSSSNSTNNENNDNNENSVSTVTTQNTQQVLDDAYKPDLSNCNSREEFESVSQTNNFSWGSFGHVFDRFPFAHVLDHMPKTDDSLADTVDMELLEFERMKVERQISASLYAINGVQEYMAVQDSNEALWDLPPLCSLFC* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1969 277 MobiDBLite consensus disorder prediction 1 35 - -
Dod01g1969 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 11 264 - -
Dod01g1969 277 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Dod01g1969 277 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Dod01g1969 277 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Dod01g1969 277 MobiDBLite consensus disorder prediction 1 16 - -
Dod01g1969 277 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Dod01g1969 277 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Dod01g1969 277 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 264 - -
Dod01g1969 277 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Dod01g1969 277 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Dod01g1969 277 MobiDBLite consensus disorder prediction 110 161 - -
Dod01g1969 277 MobiDBLite consensus disorder prediction 122 161 - -
Dod01g1969 277 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1969 Dod-Chr1 55228880 55229713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1969 22 277 AP2-EREBP Transcription Factor Family AT5G19790 43.173 9.00e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod01g1969 AP2 6.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1969 K09286 - gmx:100796898 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1969 01 55228880 55229713 Dod01g1969 01 55228880 55229713 ECH
Dod01g1969 01 55228880 55229713 Dod02g2047 02 38055976 38056794 PCT