Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1957 ATGCAGTCGCACCTCCTCACAGGACCCATCTCCGTCGCGCCCTACGGTAGCGCCACCTCCTCTGTCGCCGATTCCAATCCCTTCCTCTCCCCCAGCACCGCCGCTCCTCCGATCTGGATCCGCCGCCATCGCCGGCGGCTCCGGTGGGCCCCATTCGTCGCAGCATCATCTGCATCCTCGTCGGCCGCGGCGGTTAACGGTGGCGGGTGGAGCCTCTATGCGGTTCTCGGAGTCTCTCAGACCGCTACCGCAGCCGAGATCAAACGCGCCTACCGGCTCCTCGCCCGCAAGTATCACCCTGATGTTAGCAAAGATTCACAAGCTGCTGAATTGTTCAAGAGCATCCGTCATGCATATGAAGTACTATCCAATGAAGCAATGAGAATTCAGTATGATAAGGAACTTCAATTCGGTTACACGGGTTACAGAGAAAAATGGAGTTGCAGCAATGAATTTGAAGATCAGGTAAGAATGTATAGATGGGCCAACTTGAGGGAAAAAATGCATGATGAAAGATATTGGGAGCATTACAATGTCGATGAGGGCTACTACAGCAGTGAAATAGATGAGGAGGAAGATGAAGGGAATTCAGAGGAAGAGAGGGGTTCTTTTATTGAAGTGCTTAGATCAGCATTCATGTCAATATTTTTGTTCCAGACTTTAGGATCCCGCCTTTCTCTTACATTTAGCAGTCTGATGGCATTGCTTGATAAGAAGTTAGACAATGGCTATAAATTTGGTTATGTAATAGCATGGATTTTGGGTGGAAGGGGTGGCATATTGCTAACATTGTGCCTCTCATTTGCAAGTTGGGTTTGTGGGAAAACCAGTAGTAGTGTAGTGGCACTAGTGATGGTAGCAATGTGGGTTGGCTCCTACCTTGCAAGTTACGCCCCTCTTCCCCAAGGTGCTTTATTGACACTCATCTACATGTCCATTAAGCTACAATCTGATCAATTATGA 963 0.487 MQSHLLTGPISVAPYGSATSSVADSNPFLSPSTAAPPIWIRRHRRRLRWAPFVAASSASSSAAAVNGGGWSLYAVLGVSQTATAAEIKRAYRLLARKYHPDVSKDSQAAELFKSIRHAYEVLSNEAMRIQYDKELQFGYTGYREKWSCSNEFEDQVRMYRWANLREKMHDERYWEHYNVDEGYYSSEIDEEEDEGNSEEERGSFIEVLRSAFMSIFLFQTLGSRLSLTFSSLMALLDKKLDNGYKFGYVIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVMVAMWVGSYLASYAPLPQGALLTLIYMSIKLQSDQL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1957 320 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Dod01g1957 320 SMART dnaj_3 70 127 IPR001623 -
Dod01g1957 320 CDD DnaJ 73 124 IPR001623 -
Dod01g1957 320 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 315 - -
Dod01g1957 320 Pfam DnaJ domain 72 132 IPR001623 -
Dod01g1957 320 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 315 - -
Dod01g1957 320 Gene3D DnaJ domain 71 216 IPR036869 -
Dod01g1957 320 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Dod01g1957 320 SUPERFAMILY Chaperone J-domain 71 142 IPR036869 -
Dod01g1957 320 PRINTS DnaJ domain signature 91 106 IPR001623 -
Dod01g1957 320 PRINTS DnaJ domain signature 73 91 IPR001623 -
Dod01g1957 320 PRINTS DnaJ domain signature 107 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1957 Dod-Chr1 54817575 54821731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1957 73 132 C2H2 Transcription Factor Family AT1G74250 39.394 3.94e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1957 - - adu:107494507 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1957 01 54817575 54821731 Dod01g1957 01 54817575 54821731 ECH