Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1949 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGTGATCTTCAGCCTGGTCCACTACCTGTTGATCAAGGAGAGAATTGGGTGCAACCTGCTCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGACGAACTGCAGCTGGTAGAGGCCGTGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTGAGGTCCTTCCAGAACCTGTTGCTTTAGCAGCTGCTGATCCTGTTTACAATCACGTAGAGGTAGTGGCTAATAATAATATTGCAATGGGGGGTGGAAGTGCAGAGAAGGTGGTGGGAGCTGAAGAAGAAGCAAGCACAACCCCTGTCCCTGAGAGGGTACAAGTTGGAAACTCTCCTGTATATAAGATTGAAAGGAAATTGGGTAAGGGTGGTTTTGGCCAAGTTTATGTTGGCCGAAGGGTAAATGGTGGCTCTGATAGAACTGGTCCTGATGCGATTGAGGTTGCATTAAAGTTTGAGCACAGAAACAGTAAAGGCTGCAATTATGGGCCACCTTATGAATGGCAAGTCTACAGTACTTTGAATGGTTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGACTTTTACATTCTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATAATCTTGGCCAATCGATGTCGCCAAGTATGGTTGCTTGCATTGCAGTGGAGGCAGTATCAATCCTTGAGAAGCTCCATTTGAAAGGATTTGTGCATGGAGATGTAAAACCAGAAAATTTTTTGCTCGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATCTCATTGATCTTGGATTGGCATCTAGATGGAAGGATGCATCATCTGGCCAACATGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACGATAAGATATGCCAGTGTACATGCACATTTAGGTAGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCATACACGTTAATATTTCTCATTAAAGGAAGATTACCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGGCCACGTCTCCAGAGTTGATGTGCTGCTTTTGTCCCCCTCCATTTAAGCAGTTCCTTGAAGCTGTTACTAATATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTTATATCACTTTTTGAAAGCTTAATTGAACCTTGCACTCAATTGAGACCTATCAGAATAGATGGAGCTTTGAAGGTCGGTCAAAAGCGAGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAGCCTAAGAAGAAAGTGCGACTGGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAACGCACGCCGTCCCATGAAGCAGAGGTATCACTATAATGTAGCAGACACTAGGCTCCGGCAGCACGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTTCAGCAAATCTCTGGGCCCTAATTATGGATGCAGGAACAGGTTTTTCTTCCCAGGTATATGAGTTGTCACCAGCTTTCCTGCATAAGGATTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACACAGCAGTCCTACAAAGTGAGTGAATCATTTCCTTTTAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAATCGCTGGGGTGTTGTTATGTCTAGGAATGCTGGGTACTCAGATCAGGTTGTGGAGCTCGACTTTTTGTATCCAAGTGAAGGAATCCATCGGAGATGGGAGAGTGGTTACCGGATTACATCTATGGCTGCTACTACCGATCAGGCAGCCTTCATACTGAGCATACCAAAACGGAAATTGCTTGATGAAACGCAAGAGACACTCCGTACATCTGCCTTTCCTAGCACCCATGTAAAGGAAAAATGGTCCAAGAATCTCTATATTGCCTCAATATGTTATGGGCGAACTGTTTGCTAG 2127 0.4476 MPELRSGARRSKRLGDLQPGPLPVDQGENWVQPAQNRTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALAAADPVYNHVEVVANNNIAMGGGSAEKVVGAEEEASTTPVPERVQVGNSPVYKIERKLGKGGFGQVYVGRRVNGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNNLGQSMSPSMVACIAVEAVSILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPPPFKQFLEAVTNMRFDEEPNYSKLISLFESLIEPCTQLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATTDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1949 708 MobiDBLite consensus disorder prediction 1 72 - -
Dod01g1949 708 CDD STKc_CK1 147 421 - -
Dod01g1949 708 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Dod01g1949 708 SUPERFAMILY Protein kinase-like (PK-like) 147 433 IPR011009 -
Dod01g1949 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Dod01g1949 708 PANTHER CASEIN KINASE-RELATED 104 682 - -
Dod01g1949 708 Pfam Protein kinase domain 147 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1949 708 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1949 708 PANTHER BNAA05G37270D PROTEIN 104 682 - -
Dod01g1949 708 Gene3D Transferase(Phosphotransferase) domain 1 116 467 - -
Dod01g1949 708 SMART serkin_6 147 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1949 Dod-Chr1 54755530 54762938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1949 227 421 MAP Kinase Kinase Kinase AT5G50180 24.121 1.16e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dod01g1949 Pkinase 2.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1949 - - gmx:100801967 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1949 01 54755530 54762938 Dod01g1949 01 54755530 54762938 ECH