LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod01g1888	ATGATGAATCCTTTTGCGGCATCATCATCACCATCGTCCAAGTCCAAGAAGAAGCAAACGACGGCCAAAACGGCGACGCCACAAGAGCAGAACCAGCATGAAACGGCGTGGGGAGGGAGGTACCTCGGGGTGAGGAGGAGGCCGTGGGGGAGGTACGCGGCGGAGATTCGAGACCCCTCCACGAAGGAGAGGCACTGGCTGGGCACCTTCGACACCGCGGAGGAGGCCGCCCTAGCATACGACAGGGCGGCCCGCTCCATGCGCGGGTCGCGTGCCCGCACCAACTTCGTGTACCCTGACACCCCACCGGGGTCGTCAGTGACACCAATCCTATCACCCGATCAACTACAGTCCCAGACTCACAATCACCACCACCACCATGTCCATGACCTATCCTCACTCTTTCCTTCCAACCAACTCACCCAACAACCCGACCCGAATCCGACACTCGACCCGGTCACGTTGTTGGAGGTGGCAGCGGGTGGTAACAACAACTGGGGCTATAGTTACGGTTATAGTAATGATCACTACAATAATAATAATAATATTGATAATTACTATAACTGTAATTATAATGAAGGTGCAGGTGGCACGGTGGAAGGTTCCAATTTGGGGCACGTGCTTTTTGAGGATGGTGGCACTAGCACTACTAGTACAAGCACTAGCGCAAGCACCATAGAGCTTCCTCCTTTGCCACCAGATATTACTAGCTCCGCGGGTTATGAAATGGATCAGGATCAAGCAGGGTATGGGTATTATTGGGAGCACAACAACGCTGGGGATTATGTGCATGGTCCAATGTTCAGCGCAATGCCCTCTGTGTCAGAGAATGTGGCAGCAACTACTGAGGGTCTTGATTCGGGGAGCTCCTCTTATTTCTTCTGA	885	0.5345	MMNPFAASSSPSSKSKKKQTTAKTATPQEQNQHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTPPGSSVTPILSPDQLQSQTHNHHHHHVHDLSSLFPSNQLTQQPDPNPTLDPVTLLEVAAGGNNNWGYSYGYSNDHYNNNNNIDNYYNCNYNEGAGGTVEGSNLGHVLFEDGGTSTTSTSTSASTIELPPLPPDITSSAGYEMDQDQAGYGYYWEHNNAGDYVHGPMFSAMPSVSENVAATTEGLDSGSSSYFF*	295

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dod01g1888	294	MobiDBLite	consensus disorder prediction	1	35	-	-
Dod01g1888	294	MobiDBLite	consensus disorder prediction	94	131	-	-
Dod01g1888	294	ProSiteProfiles	AP2/ERF domain profile.	40	97	IPR001471	GO:0003700\|GO:0006355
Dod01g1888	294	PANTHER	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	5	294	-	-
Dod01g1888	294	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	5	294	-	-
Dod01g1888	294	Pfam	AP2 domain	41	89	IPR001471	GO:0003700\|GO:0006355
Dod01g1888	294	SMART	rav1_2	40	103	IPR001471	GO:0003700\|GO:0006355
Dod01g1888	294	MobiDBLite	consensus disorder prediction	99	118	-	-
Dod01g1888	294	Gene3D	AP2/ERF domain	39	98	IPR036955	GO:0003700\|GO:0006355
Dod01g1888	294	SUPERFAMILY	DNA-binding domain	40	97	IPR016177	GO:0003677

Showing 1 to 10 of 16 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod01g1888	Dod-Chr1	53756983	53758227	Transposed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod01g1888	12	278	AP2-EREBP Transcription Factor Family	AT5G13910	41.636	1.16e-49	162

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Dod01g1888		AP2	2e-13	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod01g1888	K09286		-	gmx:100809600	238.039

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod01g1888	01	53756983	53758227	Dod01g1888	01	53756983	53758227	ECH

Showing 1 to 1 of 1 entries