Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1864 ATGTCCATCTTGCCCTCACAAACCCAGAAAGCACCATCGTCGTCTTCCTCTGCACCAACTCCAAACCCTAATCCCCAACATGGAATTTCAAGCGCGCTTCCTCCTCCTTCCTCTTCCCTTTCTCCTCTCTCCCAACAACAACACAATCCTTCTTTCGGATCCCTTCGGATCTCCGATCCCCAATCCCCTCGCCACCATCCAGTTCCATCAGCTCCAGCTACGGAAGATTCTGGTGGACCTTCCGAAAAGGTGACAGAATCAGTGTCTCCGACTGGTATAAAGTCTTCACCTCAGCAAAACTCTGGAACACATTCTAGGAGTCACCCAGGGAGACGGACAGCTGGATCCTCTCATAGAAATCAACAGACCCATGGGTCTGTGAATTCTCAGGGAAGTACCCCTTCAGCAGGAAGGAAATCTCAGATGGTGAATGGCAATTACTTGCTGAATTTTCATTATGATCCAATATCCCGTTCTCAATCGAGGGGTCCACCACCTCCTCCTCCAAGAAGGCAGAGGAAGAGAAAACCATACAACAAGGATTTGTTTTTGCAGGCTAATTACAAATTCATGGTGCTAGACTCAGGAAATTATTCACCTGAGCATATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGCGTGACTTATTCGACCCCCTTTCCAGTTCAGTGTCCAATTTGCTTGGAGTATCCCTTGTGTCCTCAAATAACATCATGTGGACATATTTTCTGTTTCCCATGTATTCTACAGTACTTGTTCTTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGATATCTGCCAAGGATTTATATACCGTCCATATCACAAACGTCAAACAGTATCGGGTAGGGGATACCATTGAGTTCACCTTTTTAACACGAAAAAAGGATTCATTTACTTTGTCGCATAAAAATAAAGAAGAGACAGATATCATGGCGTGTAGCAATGGAGAATTATGTGACCCCTTTTCCAAGTTCACACTCACATCAGATGTTGAACTCTCTGTTAGACATGCAATATCAGATCTAGATGGCTGGCTGGCCAGAGCTGATTCAGGCCTTGTTGATGACCTGGAGAAGCTTCCTTATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAAAAATATTGGAATGAGCATAGGGCTTCAGACAGTGGAAAGTCTTCAAGGCCTATTGATTATGAACTTCAGATACCATCAACAGCTGCAAATGCTATGGATTCTGAAGATGAATCCCTTTCTAATGGATCAAGAACTTCCTCTACAGATTTCCATGACCATAGTAGGGGCATATTATTGGATAAGTCAACTGCTGGAGCTAGCCTGGATCAAACTTTGGATGGGCAGAAAGCATTAATAGAACAAGAAATTAATTTATCCTCTTCATATGAGGAGAAGAATGGTATTCAAAGGCATTCGAATGGCATTGGAGATACAAAGGAAAGTGACTCTTACAATTTCTACCAGGCTGCAGATGGTCAACATATAATTCTTCATACATTGAACATGAAGTGTTTACTTCATCATCATGGGAGCTATGACATGCTTCCGCACAGAATATGTGGAAGGATTCTGCAATTAGAAACTGTTACCCAGTCTGAGGCCATGAGGAGGCGATATAAATTCCTAAGTCATTTTCCATTAACAGCAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATGTTGCCTTCTGAAGCTTTTGCCCCATTTATGGATGAAATAAAGAAGCGTGCACATCAGAGGAAGCAACTTGCAAAGAAGGAACGAAAGGAAAAAATCAAGGCTGAAGGTGCTTCTACTTATTCTCTTCCCATACCAAGTTATAAGGTTACTGGTCATGATGATTCTCCAACATTTTCCATGGATGACTTTGAAGCCTTGGGAAATTCAGCCATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAATCGTTCTCAAACGTCACTAGGCTTGGTTTTGCTGCTGGTCATGATTCTCCATCCTTACAAAACCAAGAAACCAGCAGTCCACATAATAGCGATACAGTAGCTGATTCTTCTGGCACATCAGGTCCGAGAAACGTGGAGACTCCATCATATTCCAATGTTATATCCAGAGCAGAATCTAATATAAGCTTGAATGCACCAAAGACAAGTGACTTGGGGAAGAAGGGAAAGAAACAAAGTCGAGTTCTTATGTCAACAGCTGGCGGCAGGCGCTATTAA 2247 0.4263 MSILPSQTQKAPSSSSSAPTPNPNPQHGISSALPPPSSSLSPLSQQQHNPSFGSLRISDPQSPRHHPVPSAPATEDSGGPSEKVTESVSPTGIKSSPQQNSGTHSRSHPGRRTAGSSHRNQQTHGSVNSQGSTPSAGRKSQMVNGNYLLNFHYDPISRSQSRGPPPPPPRRQRKRKPYNKDLFLQANYKFMVLDSGNYSPEHMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLFLGEEDHKGDCWKRCPLCFVMISAKDLYTVHITNVKQYRVGDTIEFTFLTRKKDSFTLSHKNKEETDIMACSNGELCDPFSKFTLTSDVELSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRASDSGKSSRPIDYELQIPSTAANAMDSEDESLSNGSRTSSTDFHDHSRGILLDKSTAGASLDQTLDGQKALIEQEINLSSSYEEKNGIQRHSNGIGDTKESDSYNFYQAADGQHIILHTLNMKCLLHHHGSYDMLPHRICGRILQLETVTQSEAMRRRYKFLSHFPLTATFQLCEIDLSEMLPSEAFAPFMDEIKKRAHQRKQLAKKERKEKIKAEGASTYSLPIPSYKVTGHDDSPTFSMDDFEALGNSAMSSSPPVVGERKSFSNVTRLGFAAGHDSPSLQNQETSSPHNSDTVADSSGTSGPRNVETPSYSNVISRAESNISLNAPKTSDLGKKGKKQSRVLMSTAGGRRY* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1864 748 MobiDBLite consensus disorder prediction 418 439 - -
Dod01g1864 748 CDD RING-HC_RNF10 227 274 - -
Dod01g1864 748 ProSitePatterns Zinc finger RING-type signature. 242 251 IPR017907 -
Dod01g1864 748 MobiDBLite consensus disorder prediction 418 434 - -
Dod01g1864 748 MobiDBLite consensus disorder prediction 80 140 - -
Dod01g1864 748 MobiDBLite consensus disorder prediction 155 178 - -
Dod01g1864 748 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 325 IPR013083 -
Dod01g1864 748 ProSiteProfiles Zinc finger RING-type profile. 227 273 IPR001841 -
Dod01g1864 748 SUPERFAMILY RING/U-box 226 280 - -
Dod01g1864 748 Pfam Zinc finger, C3HC4 type (RING finger) 227 273 IPR018957 GO:0046872
Dod01g1864 748 MobiDBLite consensus disorder prediction 668 748 - -
Dod01g1864 748 PANTHER RING FINGER 10 FAMILY MEMBER 98 744 IPR039739 -
Dod01g1864 748 MobiDBLite consensus disorder prediction 672 724 - -
Dod01g1864 748 MobiDBLite consensus disorder prediction 1 58 - -
Dod01g1864 748 MobiDBLite consensus disorder prediction 1 140 - -
Dod01g1864 748 SMART ring_2 227 273 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1864 137 698 C3H Transcription Factor Family AT3G26730 57.633 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1864 - - adu:107494651 1163.67