Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1847 ATGGCGAGCAGGTACTGGATAGTGTCTCTTCCCGTCCACAACTCCGCTTCCACTCTCTGGAACCAATTGCAGGAACAAATCTCCAAGCACTCTTTCGATACTCCTCTTTACAGATTCAACATCCCAAATCTCCGTGTCGGAACCCTAGACTCTCTCCTCTCTCTCAGCGATGATCTCGCCAAGTCCAATAGTTTCATGGAAGGAGTGTCGCAGAAGATCCGGCGCCAGATTGAGGAACTGGAGAGGGTTTCCGGCGTCGAGAGCGGCGGCCTCACCGTCGACGGAGTTCCTGTTGATTCCTACTTGACCAGATTTGTTTGGGATGAAGCTAAGTACCCAACTATGTCGCCGTTGAAGGAGATCGTGGATGGAATTCATGGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTCGTGTTTCCGAGTATAACAATATCCGTAGTCAGCTTAATGCTATCAATCGAAAGCAAACTGGAAGCTTAGCTGTCCGTGATCTTTCCAACTTGGTAAAACCTGAGGATATCATAACTTCAGAACATTTAACTACTCTCCTTGCAATTGTTTCCAAGTATTCGCAGAAGGATTGGCTCTCAAGCTATGAAACATTGACAAGCTATGTGGTCCCCAGATCTTCCAAGAAGTTGTATGAGGATAATGAATATGCTCTTTATACTGTTACACTCTTCAATCGTGTTGCAGACAATTTTAGAACTAGTGCACGTGAAAAAGGTTTCCAGATTCGTGATTTCGAATACAGTCCAGAAACACATGAGAGTAGAAAGCAAGAGTTAGATAAATTGATGCGAGATCAGGAAAGCTTGAGAGGTTCTCTGTTGCAGTGGTGCTATACCAGTTACGGAGAGGTTTTCAGCTCCTGGATGCACTTCTGTGCTGTGCGTTTATTTGCTGAGAGCATCCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTCTTAGCTCCATCTACAAAAGCTGAAAAGAAAGTACGTTCCATCCTTGAGGGGTTGAGTGATAGCACAAACAGTGCATACTGGAAGACCGAGGATGATGTAGGTGGTGGTATGGCTGGTCTAGCAGGTGATGCTGCTGATGCCCACCCCTATGTCTCCTTCACCATCAATCTTGTTTGA 1134 0.4577 MASRYWIVSLPVHNSASTLWNQLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNSFMEGVSQKIRRQIEELERVSGVESGGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEHLTTLLAIVSKYSQKDWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHESRKQELDKLMRDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSTKAEKKVRSILEGLSDSTNSAYWKTEDDVGGGMAGLAGDAADAHPYVSFTINLV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1847 377 Pfam V-ATPase subunit C 5 370 IPR004907 GO:0033180|GO:0046961|GO:1902600
Dod01g1847 377 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 - -
Dod01g1847 377 Gene3D Vacuolar atp synthase subunit c; domain 1 5 334 - -
Dod01g1847 377 CDD V-ATPase_C 5 374 IPR004907 GO:0033180|GO:0046961|GO:1902600
Dod01g1847 377 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Dod01g1847 377 SUPERFAMILY Vacuolar ATP synthase subunit C 2 376 IPR036132 GO:0015078|GO:0033180|GO:1902600
Dod01g1847 377 Gene3D - 41 312 - -
Dod01g1847 377 Gene3D - 163 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1847 1 376 Primary Pumps ATPases(2) AT1G12840 83.511 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1847 K02148 - gmx:100813963 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1847 01 53199705 53204452 Dod01g1847 01 53199705 53204452 ECH