Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1840 ATGCCACCGGCCCCCAACCACCGCCGCCGTGCGACCTCGCCACCCTTACCCAGCCGCCGCGTGCTCCTTCTACTTCTCCATTTGGGTCCATATCCTCGTCAACTCGACGATGCTCACTTCGCAAACAGAGCTACGAGCCCTCATCACCAGCTCCACCACCTTCAGCTGGTCAAGAGTGTCACTGGCAGCAAAATCCTTCACATTCTGAAAGCTCACGGACTTGCGCCTGAGATCCCTGAGGATCTGTACCATTTGATCAAGAAGGCAGTGTCGATTAGGAAGCATCTGGAAAGGACAAGGACTCTAAGTTTAGAATCCACAGGCTTGCTCGCTACTACAAGAAGACCAAAAAGCTGCCACCTGCATGGAAGTATTTTTTGCTTTGTGTGCAGTGCATTGAAGTGGAAACTTAAGAACATAGACAGGGTGCAATATGTTGGTGTAAAGGAATTGATACTAAGCTGGTTGCATTTCCAGATGCTATATACTTGGTTGATGCAATTGAAGGGGAAGATGTGCTTAATCAAAGCCTGTAAGCTTGCACTTGAGTCTGATCATAGTCACAAAAGTTATTCATGA 579 0.4819 MPPAPNHRRRATSPPLPSRRVLLLLLHLGPYPRQLDDAHFANRATSPHHQLHHLQLVKSVTGSKILHILKAHGLAPEIPEDLYHLIKKAVSIRKHLERTRTLSLESTGLLATTRRPKSCHLHGSIFCFVCSALKWKLKNIDRVQYVGVKELILSWLHFQMLYTWLMQLKGKMCLIKACKLALESDHSHKSYS* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1840 192 Gene3D - 77 114 - -
Dod01g1840 192 PANTHER RIBOSOMAL PROTEIN S15P/S13E 52 100 IPR023029 -
Dod01g1840 192 SUPERFAMILY S15/NS1 RNA-binding domain 60 100 IPR009068 -
Dod01g1840 192 Gene3D - 50 76 - -
Dod01g1840 192 PANTHER 40S RIBOSOMAL PROTEIN S13-1-RELATED 52 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1840 Dod-Chr1 53081823 53083602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1840 32 100 Cytoplasmic Ribosomal Protein Gene Family AT3G60770 61.039 8.80e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1840 K02953 - thj:104814082 88.1965