Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1837 ATGAAGCCCAAGAAAATTCATGAGATTAAGGACTTCCTCCTCACAGCCCGGAGGAAGGATGCATGCTCTGTTAAAATCAAGCGTAGTAGAGATGTGGTCAAGTTCAAGGTTTGTTGCTCCAAGTACCTCTACACCCTTTGTGTCTTTGACCCTGAGAAGGTTGATAACTTGAAGCAATCACTTCCTCCAGCCTATGTAGATATTCAGGCTTTGTGA 216 0.4398 MKPKKIHEIKDFLLTARRKDACSVKIKRSRDVVKFKVCCSKYLYTLCVFDPEKVDNLKQSLPPAYVDIQAL* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1837 71 PANTHER 60S RIBOSOMAL PROTEIN L38 3 65 - -
Dod01g1837 71 Gene3D - 2 69 IPR038464 -
Dod01g1837 71 PANTHER 60S RIBOSOMAL PROTEIN L38 3 65 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod01g1837 71 Pfam Ribosomal L38e protein family 3 65 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1837 Dod-Chr1 53016509 53017463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1837 3 64 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 83.871 3.39e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1837 K02923 - gmx:100305707 114.775