Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1836 ATGCTGCTGCTGCCGTGCGACTACTGCGACTCCAAAACGGCGGTGCTGTTCTGCCGGGCGGACTCGGCGAAGCTGTGCCTGTCGTGCGACCAGCACGTGCACTCCGCGAACGCACTCTCCCTCAAGCACGTGCGCTCCCAGATTTGCGACAACTGCCGGAACGAGCCAGCCGCCGTGCGCTGCTCCACCGACAACCTCGTACTCTGCAACGACTGCGACTCCGACGCCCACAACGCCTCCTCGGTGGCCTCCTCCCTCCACGCGCGCCGCCGCATCGACGGCTTCTCCGGCTGCCCCTCCGCCCTCGAGATCGCGGCCGCCCTCGGCATCGACCTCAAGTCCGACAACGGCCCTGTCCGGTCGGGTCGTCGTGAGTTCGAGGAGTTTAAGGGTCCCGTGGTCCCAGTTGTGCGGTGCTCTGTCTCTTCGGGCAAAGGTCATGGGGTGCTGAAGGACGAGGTGTATGAGCAGGTGGTGGAGATGGCGAGGAGGAAGAGCGCTGCTGCGGCTCATCATGGAAATGGAAATGAAGATGAAGATGAGTTGGGTCCTGTTACGCCACCGTGTGTGCAGGGTGCTGTGGAGAGCGTTGAATTGAATAATAATAGCTACAACAACAACAATAATAATAGTGGGAATAATGATGCTGAGTTATTGATACAGCAAACGCCGTTCACGTCTTTGCTCATGTTACCGTCTGATGGTGGCGAAATTAGGAGAAACGATTACGGGAGTGAAGGGGATCTTCTTTGGACTTGTAATCCCGCGTATCAGCCTCCTCAGGTATGGGATTTTCAGTTGCAGAAATCAAGAGATTGTAGTGAAGCAGGGATGCTCGCATTTGATAGTCTAGAAGAAACTTCCATAGTGATTCCAAAAACATTGCACGATGTCCGCAATTTGAATTCCTCAACAGTTGATGATATTCTATCAAGAAATAATCAATCAGATCAGTCATCATCAAACCATGTGATGAAGAAAGAAGAAAGCAACAAGAAAGGTAGATGTGGATTATCATCAGAGTCCAAAGCGATTGAATCCATAACATACAGTAGAACCAACAACGCCACATACATGGAGCGTCTTGTGGGTGGGAGTGAAACCATTAAAGACAAAGTTAGCTCGGAAGAGCTAGCGAAAAATAGAGGTGATGCCATGCTTCGCTACAAGGAAAAGAAGAAAACTCGGAGGTACGATAAGCACATTCGCTATGAATCAAGAAAGGCCAGGGCTGATACGAGACAGAGGGTGAAAGGACGATTCGTGAAGGCAAGTGATACAACTGAGGATCAAAATCAAGCATGA 1305 0.5149 MLLLPCDYCDSKTAVLFCRADSAKLCLSCDQHVHSANALSLKHVRSQICDNCRNEPAAVRCSTDNLVLCNDCDSDAHNASSVASSLHARRRIDGFSGCPSALEIAAALGIDLKSDNGPVRSGRREFEEFKGPVVPVVRCSVSSGKGHGVLKDEVYEQVVEMARRKSAAAAHHGNGNEDEDELGPVTPPCVQGAVESVELNNNSYNNNNNNSGNNDAELLIQQTPFTSLLMLPSDGGEIRRNDYGSEGDLLWTCNPAYQPPQVWDFQLQKSRDCSEAGMLAFDSLEETSIVIPKTLHDVRNLNSSTVDDILSRNNQSDQSSSNHVMKKEESNKKGRCGLSSESKAIESITYSRTNNATYMERLVGGSETIKDKVSSEELAKNRGDAMLRYKEKKKTRRYDKHIRYESRKARADTRQRVKGRFVKASDTTEDQNQA* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1836 434 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 427 - -
Dod01g1836 434 Pfam CCT motif 382 424 IPR010402 GO:0005515
Dod01g1836 434 ProSiteProfiles Zinc finger B-box type profile. 44 92 IPR000315 GO:0008270
Dod01g1836 434 MobiDBLite consensus disorder prediction 322 336 - -
Dod01g1836 434 MobiDBLite consensus disorder prediction 406 434 - -
Dod01g1836 434 ProSiteProfiles Zinc finger B-box type profile. 6 48 IPR000315 GO:0008270
Dod01g1836 434 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-LIKE 4 427 - -
Dod01g1836 434 MobiDBLite consensus disorder prediction 406 425 - -
Dod01g1836 434 Pfam B-box zinc finger 46 78 IPR000315 GO:0008270
Dod01g1836 434 ProSiteProfiles CCT domain profile. 382 424 IPR010402 GO:0005515
Dod01g1836 434 SMART bboxneu5 1 48 IPR000315 GO:0008270
Dod01g1836 434 SMART bboxneu5 49 92 IPR000315 GO:0008270
Dod01g1836 434 CDD Bbox1_BBX-like 5 48 - -
Dod01g1836 434 MobiDBLite consensus disorder prediction 306 321 - -
Dod01g1836 434 MobiDBLite consensus disorder prediction 306 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1836 Dod-Chr1 53007801 53011885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1836 3 426 C2C2-CO-like Transcription Factor Family AT2G33500 39.474 1.67e-74 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Dod01g1836 CCT 1.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1836 - - ahf:112697135 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1836 01 53007801 53011885 Dod01g1836 01 53007801 53011885 ECH