Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1832 ATGGCAGACCCTGCAGCCATCTACGACTTCCTGAACCAAACCCCTGCTGATGATTCCAAAGCAGCTGCAAAGAGAACAGCACAACAACAACAACAACCCCAATTCAACCACCACCACCACCAGCCACCCTCTTCAACAAGGACCTTCCAATGCCACTTCTGCAACCGCAAGTTCTACACCTCCCAAGCACTTGGCGGGCACCAGAACGCACACAAGCTCGAGAGAGCAGCAGCTAGGAGAACCACCACCCTTCCAGCTTTCCAACACAATGGGAACATGCCAACGCCAACACCAACACCAACACCACAAACACAAACACTACCATTGCCATTGCCATTGGAGTCCCCAACTAATTGTCTTCTCAAGAACAGCAACAACAACAACAACATCATCAGCGACCCCACCAAGGCCATGATGGCCATGGCGGGCATGCCTCATCATCATGAACTGGAGCTGGAGCCTCCAGTAGGGGGAGCTGTTCCTTCTTCTTCTCCTCATGGTCGTTTCTTTGGCCACCCTTATTGGGTGGAAATGGAGCCGCCATTGCAGCAGCTTCAAACCCATCACCAATATCACCTTCATCACCATGTTCCAACCACTCATGTGAATCCTTTGGCCTTCCATGCTGCTGCTGCTGTTGCTGGGGGTTCGGGTTCTTCAACTCCTCAACATGTTCTCTCCCATAATGCTGCTGCTGCTGCTGCTGCTTCTTCTGATGCTTCTGACCACGTCAACCTCGACCTTACACTTCGCTTGTGA 759 0.5204 MADPAAIYDFLNQTPADDSKAAAKRTAQQQQQPQFNHHHHQPPSSTRTFQCHFCNRKFYTSQALGGHQNAHKLERAAARRTTTLPAFQHNGNMPTPTPTPTPQTQTLPLPLPLESPTNCLLKNSNNNNNIISDPTKAMMAMAGMPHHHELELEPPVGGAVPSSSPHGRFFGHPYWVEMEPPLQQLQTHHQYHLHHHVPTTHVNPLAFHAAAAVAGGSGSSTPQHVLSHNAAAAAAASSDASDHVNLDLTLRL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1832 252 MobiDBLite consensus disorder prediction 23 47 - -
Dod01g1832 252 MobiDBLite consensus disorder prediction 85 108 - -
Dod01g1832 252 MobiDBLite consensus disorder prediction 1 47 - -
Dod01g1832 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Dod01g1832 252 SUPERFAMILY beta-beta-alpha zinc fingers 46 76 IPR036236 -
Dod01g1832 252 PANTHER ZINC FINGER PROTEIN JAGGED 23 252 IPR045320 GO:0003700
Dod01g1832 252 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Dod01g1832 252 Gene3D Classic Zinc Finger 21 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1832 Dod-Chr1 52904622 52905380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1832 43 80 C2H2 Transcription Factor Family AT5G14010 78.947 4.40e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1832 - - ahf:112759108 143.28