Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1821 ATGGGTCGTTGCCCGTGTTTTGGGCTGAGGAAGAAGGCCAAAGGGGATAAGCTTAGGGCTCAGGAGGCAGAGCAGAAGGAAAGCAAGGTTGGGAAAAAACAGAGCACTATCTCTGAAAGATCTTCAGGAGTAAGATCAGAAGCAACTCCAATAGAGGAGACTGACAATTCTAACAAGGCTCAGATATTTACCTTCCGAGAGCTTGCAACGGCGACAAAAAATTTTAGGGATGAAACATTCATTGGGCAAGGAGGATTTGGAACTGTTTACAAAGGAAAGCTAGAAAAGCTGAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACTGGTGTCCAAGGGGAGAAAGAGTTTCTAGTGGAGGTTCTCATGCTCTCTCTTTTACGTCATCCCAACCTTGTTAATTTGATTGGTTATTGTGCTGAAGGGGATCAACGTCTTCTTGTGTATGAATACATGCCTATGGGTTCCTTGGAATCTCATCTCCATGGTCTTTCCCCAGATAGAGAACCACTTGATTGGAATACGAGAATGAAGATAGCAGCTGGGGCAGCAAAAGGATTAAATTATCTGCACCATGAAGCAAAGCCTTCTGTTATATACAGGGATCTCAAATCATCCAACATACTATTGGATGAAGGTTTCCGTCCAAAGCTTTCTGATTTTGGACTTGCAAAATTTGGTCCAACCGGAGACCAATCCTATGTCGCCACTAGGGTGATGGGAACACATGGTTACTGTGCTCCTGAGTATGCCACCAGTGGAAAATTAACAATGAGATCTGACATCTACAGTTTTGGTGTTGTGTTGTTAGAGATCATAACTGGACGTAGAGCATATGATGATACCCGTAGCCATGAAAAGCATCTTGTTGACTGGGCACGTCCAATGCTTAGAGACAGACAGAGTTTTAAAAGATTGGCCGATCCACAACTGCAAGGCCACTTCCCAGGATCCAGTCTAAAGATGGCCGTTGAATTGGCAGCCATGTGTCTTCGAGAAGAGCAGCGCCACCGGCCTGAGACAGGTGATATAGTGCTTGCTCTCGAATACTTGTCATCCAGGAAGTATGTTCCAAAACTATCCAAAGTGAACGCAGAGAATGACGAGTCTCCAAAGGAAACAACGGCTATTTTAAGCAGAGATGCAGAAAGAGAGCAAGCTGTTGCAGAGGCCAGGCTGTGGGGTGAGACTTGGAGAGACAGGAGAAGACAAAGTGGTGGCCAAAGCAGCCCTGAGGATTTAAGTCGGTAG 1251 0.4516 MGRCPCFGLRKKAKGDKLRAQEAEQKESKVGKKQSTISERSSGVRSEATPIEETDNSNKAQIFTFRELATATKNFRDETFIGQGGFGTVYKGKLEKLNQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHPNLVNLIGYCAEGDQRLLVYEYMPMGSLESHLHGLSPDREPLDWNTRMKIAAGAAKGLNYLHHEAKPSVIYRDLKSSNILLDEGFRPKLSDFGLAKFGPTGDQSYVATRVMGTHGYCAPEYATSGKLTMRSDIYSFGVVLLEIITGRRAYDDTRSHEKHLVDWARPMLRDRQSFKRLADPQLQGHFPGSSLKMAVELAAMCLREEQRHRPETGDIVLALEYLSSRKYVPKLSKVNAENDESPKETTAILSRDAEREQAVAEARLWGETWRDRRRQSGGQSSPEDLSR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1821 416 Gene3D Transferase(Phosphotransferase) domain 1 152 372 - -
Dod01g1821 416 CDD STKc_IRAK 81 349 - -
Dod01g1821 416 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Dod01g1821 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Dod01g1821 416 ProSiteProfiles Protein kinase domain profile. 75 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1821 416 MobiDBLite consensus disorder prediction 35 55 - -
Dod01g1821 416 SUPERFAMILY Protein kinase-like (PK-like) 55 349 IPR011009 -
Dod01g1821 416 Pfam Protein kinase domain 76 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1821 416 MobiDBLite consensus disorder prediction 362 384 - -
Dod01g1821 416 MobiDBLite consensus disorder prediction 17 34 - -
Dod01g1821 416 SMART serkin_6 75 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1821 416 Gene3D Phosphorylase Kinase; domain 1 33 151 - -
Dod01g1821 416 PANTHER OS07G0668900 PROTEIN 11 367 - -
Dod01g1821 416 PANTHER OS07G0668900 PROTEIN 11 367 - -
Dod01g1821 416 MobiDBLite consensus disorder prediction 17 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1821 Dod-Chr1 52719548 52726968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1821 52 404 Glycoside Hydrolase AT3G07070 58.939 4.41e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod01g1821 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1821 K13430 - gmx:100809298 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1821 01 52719548 52726968 Dod01g1821 01 52719548 52726968 ECH