Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1818 ATGGAGAAGAACCTTGCTGAGAATTCCGACAGTTCCGCTCGCAGAGACGAGCACGGAAACAGCGATAACGCCGGCGACGCGCCACGTTCTCCGATGGCCGACCCCACAGAACCCGAACCCAAACCTGACGCCGAAGCCGAAACCGAACCAGCACCCAACCAGGGAGATGAAGAAAGCGAGGAGAAGGAGTTAGAGGCCGCCGCAGAGATTGTTCCTCCCGAGTCTCCTCCCGTAAGCCTCGAGAAAGCGTCCGAAGACATTGATCAATTCCTCGCTACTGTGCGACAGAGCGATAAGAATATTGATGATGGAAGCAAAAACGACGGTGGAGATGAGGAGGGAGAGAAAGACGAAGCGTCGTTTGAGATCCCTGTTTCCGTTGACAAGTTCTTGGATCTGGTTGAGGAGAAGATAGCGACGTACGATGCAGGTGAGGAGAAGGTGAAGGAGGATTCGTCGTTGCTGGAAGCTGTGAAACGGATTTCGAATCTTTTGAAATCGTTACAGACTCATCGCCAACCGGAATCGCTTATGAACCGCGTCGGTTTGATCCAACAGCGCGCGATGTCGTATCTGGAGGAGGATTTCCGGTTGTTGATGGAAGAATATAGAAGCCCTATAGAATCGGATCCTGGCGGCGGGAGCCATTGGCACGACCACAAGGGGAAGCACGTGGCGGCGGAGCCGCCGCCGCAGGAGGATTCCGAACAGCAGCCGGCGGAATCCGAGCCGGATTTCCCGGGATATTCGGAGGAAGCCATTGCCAGCCTTAACAAAATCGCCGGCGAGATGATCGCCGGCAGTTACCAATCTGAATGCTGCCAGGTGTACATGCTCTCGAGGAGGCACGCGTTCGATGAGATCCTGCAGAAGCTAGGGTTCGAGAAGATAAGCATGGACGAGATCCAGAAGGTGCAGTGGGAGCCAATAATGGCGAGGGACATGATCCCGGCGTGGATCAACACGTTGAAGCAGTGCACCGCCGTGTACTTCCCCGGCGAGCTGAGGCTGGCGGAGGCGGTGTTCTCCGACCGGCCTTCCTTGGCGGCAGGGCTCTTCTGCAACCTCTCCCGCGGCGTGGTGATCCGGCTGCTGAACTTCGCGGAGGGTGCAGCCATGACGAGGCGCGCCAGCGAGAAGCTCTTTAAGGTCCTCGACATGTACGAGACCCTCCGGGACGTGATCCCGAAAATGGACGGACTCTTTTCGGAAGAGTCCGTGGTGGATGAGCTGAAGACGGAAATGAATCTCGCCAAGCAGAGGCTTGGCGAGACTGTTATCTCCATCTTCTGCGACTTCGAGAACTCGATAAAGGCGGACACAGCGAAGACGCCTGTCCCCGGCGGCGCCGTTCATCCTCTGACGCGCTACATAATGAACTACCTGAATACCACAGGTGATTACAAAGAGACAATGGAGCAGGTGTTCAAGGAGCATTCGAAGATCGAGCGCGCCGACTCGACCAGCAGGCCGAACCACGAGAACGAGGAGCATGGCGGCAGCAAGGAAAGTGAGAGCGAGGCTTCGTCGCCATTTGCGGCGCAAGTGATGAGGCTGATGGATTTGCTGGACTCGAGCCTTGACGCTAACGCCAGGCTCTACAGGGACGTGGCTCTTAGCAACTTCTTCATGATGAACAATGGAAGGTACATTCTGCAGAAGATCAAGGGGTCCAACGAGATGTGCCAAGTGATGGGGGACAATTGGTGTCGTAAGAGATCCTCGGAGCTGAGGACATACCACAAGAACTACCAGAGGGAGACGTGGAACAGGGTGCTGCAGTGCCTGAGCCACGAGGGTCTGAGCGTGAACGGCAAGGTGCATAAGCCAGTCCTGAAGGAGAGGTTCAAGAGCTTCAACGCCTTGTTCGACGACATACACAGGACACAGAGCTCCTGGATGGTCCAGGACGAGCAGCTTCAATCAGAGCTCAGGGTTTCAGTATCTGCAGTTGTTATCCCAGCTTACAGGTCATTCCTTGGAAGGTTTTCACAGTATTTGGACCCTGGGAGACAAACGGAGAAGTACATAAAGTACCAGCCTGATGATATAGAGACTTATATTGAGGAGTTGTTTGATGGAAAGCCCCACCAGTCCATTACTCGAAGGAGAACATGA 2118 0.5496 MEKNLAENSDSSARRDEHGNSDNAGDAPRSPMADPTEPEPKPDAEAETEPAPNQGDEESEEKELEAAAEIVPPESPPVSLEKASEDIDQFLATVRQSDKNIDDGSKNDGGDEEGEKDEASFEIPVSVDKFLDLVEEKIATYDAGEEKVKEDSSLLEAVKRISNLLKSLQTHRQPESLMNRVGLIQQRAMSYLEEDFRLLMEEYRSPIESDPGGGSHWHDHKGKHVAAEPPPQEDSEQQPAESEPDFPGYSEEAIASLNKIAGEMIAGSYQSECCQVYMLSRRHAFDEILQKLGFEKISMDEIQKVQWEPIMARDMIPAWINTLKQCTAVYFPGELRLAEAVFSDRPSLAAGLFCNLSRGVVIRLLNFAEGAAMTRRASEKLFKVLDMYETLRDVIPKMDGLFSEESVVDELKTEMNLAKQRLGETVISIFCDFENSIKADTAKTPVPGGAVHPLTRYIMNYLNTTGDYKETMEQVFKEHSKIERADSTSRPNHENEEHGGSKESESEASSPFAAQVMRLMDLLDSSLDANARLYRDVALSNFFMMNNGRYILQKIKGSNEMCQVMGDNWCRKRSSELRTYHKNYQRETWNRVLQCLSHEGLSVNGKVHKPVLKERFKSFNALFDDIHRTQSSWMVQDEQLQSELRVSVSAVVIPAYRSFLGRFSQYLDPGRQTEKYIKYQPDDIETYIEELFDGKPHQSITRRRT* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1818 705 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 65 702 - -
Dod01g1818 705 PANTHER EXOCYST COMPLEX PROTEIN EXO70 65 702 IPR004140 GO:0000145|GO:0006887
Dod01g1818 705 MobiDBLite consensus disorder prediction 99 122 - -
Dod01g1818 705 MobiDBLite consensus disorder prediction 481 504 - -
Dod01g1818 705 SUPERFAMILY Cullin repeat-like 150 693 IPR016159 -
Dod01g1818 705 MobiDBLite consensus disorder prediction 1 23 - -
Dod01g1818 705 MobiDBLite consensus disorder prediction 207 248 - -
Dod01g1818 705 MobiDBLite consensus disorder prediction 1 122 - -
Dod01g1818 705 MobiDBLite consensus disorder prediction 481 510 - -
Dod01g1818 705 MobiDBLite consensus disorder prediction 213 230 - -
Dod01g1818 705 Gene3D Exocyst complex component Exo70 128 702 - -
Dod01g1818 705 Pfam Exo70 exocyst complex subunit 318 690 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod01g1818 705 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1818 Dod-Chr1 52683151 52686309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1818 74 705 EXO70 exocyst subunit family AT5G13990 50.152 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1818 K07195 - gmx:100820172 837.795