Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1815 ATGATCAATTCACTTTGTGGAAGTTCATTATCCCTTAAGAGTGAGAACTCCATCAACAAACTCCAACCTAGTTCCTCAAATGACTCATCAATTTTGCAGTCTAAGAAGAATGCAACTCAATCCTCTGCTGATTTAGAACAAACTAGCCTAACCCCACCAAGCTTGAACCTTCCTGCACTCAAATTTGATCTTGATGGAGATGTGGAAGTCCAATCACCAGACAATTCGATGTGGGAATCCTTTTTCTCTGATCATCTAGATGGTGATTTCATGATCTCTTCCCCAGTGAGGAATGTCCCTTCCCTACAAGCCTCGACCTACAATTGCAACTACAATTATGCTCATGCAAAGCAAGGTCAGAGCCTCTCAGAGTGTTCACCACCGCGATTTTCATCCCAAAATGGAGCATATAATAGCAGCTACAATAAAGGAAAAAGGCTTAGCCCACTCCACAGGGTGCTTAACTCGCCAAATAATCAGTATATGCAGCATGTTGAGAACCTTTCACTGCCAGCAATCGAAGAGTTCTTGGAAGACTACCAAGGAGATGGACTAGCTGGTGCAGGGTACTCATTAACCAAAGTGTCTTCTGATATTGAAAGTTCATTAGAGTGCTTTGACTTGCCAAATTCGATTCCATCCATTGTGGAGACCTTGACTATGCCCAATTCCTCAAGCTACTGTGGAGGATCAGTGAGTGAAGAATCCTCAGTGCATGGTGGTTCTTCTCAACTGTCACATGACAGTGACATCTACCATCAAATGGGGTCTATGGTTAGTGCATCCTTGTCACAAGCTTTACAACAAGAACGCTACCAAGAGAAGCAGCAGAAGCAGCAAGCACAGCAGCAACAATCACACCTAAACCAACAAAGTTTGATGGTGCCCATTCCAATCGGAATGGAACAGGAGCAAGACAGTGGCCTCCAATTGGTGCACCTGCTTCTAGCATGTGCGGAGGCAGTGGCCAAAGAGGAATACATGCTGGCAAGAAGGTACCTGCACCATCTCAACAGGGTAGTAACCCCACTCGGGGACTCCATGCAACGCGTGGCATCATGCTTCACAGAATCCCTAAGTGCAAGGCTAGCCACAACCCTCACTGCAAAGCCATTAAGCACCTCTAACAACCCTAGCAAGCCTTCTCCTTCATCATCATCACCCCTATGCGGCTTCCCACTATCAAACTCCTTGGAAGTCCTCAAGATCTACCAGATCGTCTACCAGGCCTGCCCTTACATCAAATTTGCCCACTTCACAGCAAACCAGGCCATCTTCGAGGCCTTCGACGGCGAAGAGCGGGTCCATGTGATAGACCTGGATATCCACCAGGGCTACCAATGGCCCGCCTTTATGCAGGCCCTGTCAGCCAGGCCCGGAGGAGCTCCTTTCCTTCGGATAACTGGAGTCGGGGCCTACATTGAGTCGGTTAGGGAAACGGGCCGATGTCTAACCGAATTAGCCCACTCGCTCCGCATCCCCTTTGAATTCCACCCTGTTGGAGAACAGCTAGAAGACCTAAAGCCACACATGTTCAACCGCCGAGTTGGTGAGGCATTGGCCGTTAATTCAGTTAACAGGCTCCATCGAGTTCCTGGTAACTCCCTTGGGAATTTGCTATCCATGATTAGGGACCAGGCGCCAAGCATAGTGACCCTGGTGGAGCAGGAAGCCAGCCACAACGGTCCTTATTTTCTAGGGAGGTTCCTCGAGGCGCTGCATTATTACTCAGCGATTTTTGATTCCTTGGATGCTACATTTCCACCGGAATCAGCACAACGAGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATAAGGAACATTGTGGCATGCGAAGGGCCGGAGAGGATTGAGAGGCACGAGAGGCTGGACAAGTGGAGGAAGATCATGGAAGGGAAAGGGTTCAAAGGGGTGCCACTAAGTCCCAACGCGGTGACTCAATCGAAGATCTTGCTTGGGTTGTACTCAGTCGACGGGTACAGATTGACGGAGGACAAAGGTTGCTTGTTGCTGGGGTGGCAGGATAGGGCACTTGTTGCTGCTTCTGCATGGCAATGTTGA 2064 0.4908 MINSLCGSSLSLKSENSINKLQPSSSNDSSILQSKKNATQSSADLEQTSLTPPSLNLPALKFDLDGDVEVQSPDNSMWESFFSDHLDGDFMISSPVRNVPSLQASTYNCNYNYAHAKQGQSLSECSPPRFSSQNGAYNSSYNKGKRLSPLHRVLNSPNNQYMQHVENLSLPAIEEFLEDYQGDGLAGAGYSLTKVSSDIESSLECFDLPNSIPSIVETLTMPNSSSYCGGSVSEESSVHGGSSQLSHDSDIYHQMGSMVSASLSQALQQERYQEKQQKQQAQQQQSHLNQQSLMVPIPIGMEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTESLSARLATTLTAKPLSTSNNPSKPSPSSSSPLCGFPLSNSLEVLKIYQIVYQACPYIKFAHFTANQAIFEAFDGEERVHVIDLDIHQGYQWPAFMQALSARPGGAPFLRITGVGAYIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPGNSLGNLLSMIRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGPERIERHERLDKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSVDGYRLTEDKGCLLLGWQDRALVAASAWQC* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1815 687 PANTHER GRAS FAMILY PROTEIN RAM1 36 685 - -
Dod01g1815 687 Coils Coil 264 284 - -
Dod01g1815 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 685 IPR005202 -
Dod01g1815 687 ProSiteProfiles GRAS family profile. 302 686 IPR005202 -
Dod01g1815 687 Pfam GRAS domain family 311 686 IPR005202 -
Dod01g1815 687 MobiDBLite consensus disorder prediction 226 247 - -
Dod01g1815 687 MobiDBLite consensus disorder prediction 16 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1815 Dod-Chr1 52595131 52597677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1815 305 687 GRAS Transcription Factor Family AT1G66350 44.216 3.49e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod01g1815 GRAS 1.7e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1815 - - gmx:100805039 986.482