Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1813 ATGTTTAAGGAGCTTGAGATGGAAATGGCTAATGGAAATGCTTTCCAACTTAGCGTGAAGCTAAGTGAACCAACTCTAGTTGCTCCTGCGGAGGAAACCAAGAAAGGCATGTACTTCCTATCTAACCTTGACCAGAACATTGCAGTGATTGTCAGAACTGTTTACTGCTTCAAAACGGCTGAGAGAGGGAATGAGAAGGCTGGGGAAGTGCTCAAGAATGCCCTGAAGAAGGTGCTTGTCCACTATTACCCTCTTGCTGGGAGGCTGAGCATCAGCTCAGATGGGAAACTCATAGTGCACTGCACAGGTGAGGGTGCCCTCTTTGTGGAGGCTGAAGCAAACTGCACAATGGAAGAGATAGGTGACCTCACAAAGCCAGACCCAGGGACCCTTGGTAAGCTGGTTTATGACATCCCTGATGCAAAGCACATGCTTCAGATGCCTCCTTTAGTTGCCCAGGTGACCAAGTTTAAGTGTGGAGGCTTTGCTCTTGGGCTGTGCATGAATCACTGCATGTTTGATGGCATTGGTGCCATGGAGTTTGTGAACTCTTGGGGGGAAGTGTCAAGGGACTTGCCACTCTCTATCCCCCCATTTCTAGACAGAAGCATACTCAAGGCTCGCAACCCTCCTAAGATAGAGTACCTTCACCAAGAATTTGCTGACATTGAAGACAAGTCCAGCACCAACACCTTGTATGAAGATGAGATGGTCTACAGGTCCTTCTGCTTTGACCCTGAGAAGCTAAAGCAACTGAAAGCCAAAGCTATGCAAGATGGGGCTCTTCACTCTTGCACAACTTTTGAAGTGCTCTCAGCATTTGTGTGGATAGCTAGAACCAAAGCACTAAAGATGTTGCCAGACCAGCAAACAAAGCTTCTCTTTGCTGTTGATGGAAGGGCTAAGTTCAACCCTCCTCTTCCAAAAGGGTACTGTGGAAATGGGATTGTGCTGACAAATTCTGTGTGTCTAGCAGGTGAACTATCAGAAAAGCCCTTCTCATTTGCTGTGAGTCTCATTCAAGATGCAATCAGGATGGTCACAGACAGTTACATGAGATCAGCTATAGATTACTTTGAGGTCACTAAAGCTAGGCCATCTCTGGCTTGCACACTTTTGATCACAACTTGGTCTAGACTTTCCTTCCACACTACTGATTTTGGATGGGGTGAGCCTGTTGTGTCAGGGCCTGTGTCATTGCCAGAGAAGGAAGTGATCTTGTTCCTTTCTCATGGCATAGAGAGGAGAAACATCAATGTGCTCCTGGGTTTGCCAGCTCCTGTCATGAAGATCTTCCAAGAGTTGATGCAGATATGA 1317 0.4685 MFKELEMEMANGNAFQLSVKLSEPTLVAPAEETKKGMYFLSNLDQNIAVIVRTVYCFKTAERGNEKAGEVLKNALKKVLVHYYPLAGRLSISSDGKLIVHCTGEGALFVEAEANCTMEEIGDLTKPDPGTLGKLVYDIPDAKHMLQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEVSRDLPLSIPPFLDRSILKARNPPKIEYLHQEFADIEDKSSTNTLYEDEMVYRSFCFDPEKLKQLKAKAMQDGALHSCTTFEVLSAFVWIARTKALKMLPDQQTKLLFAVDGRAKFNPPLPKGYCGNGIVLTNSVCLAGELSEKPFSFAVSLIQDAIRMVTDSYMRSAIDYFEVTKARPSLACTLLITTWSRLSFHTTDFGWGEPVVSGPVSLPEKEVILFLSHGIERRNINVLLGLPAPVMKIFQELMQI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1813 438 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 18 437 - -
Dod01g1813 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 437 - -
Dod01g1813 438 Pfam Transferase family 18 436 - -
Dod01g1813 438 Gene3D - 220 437 IPR023213 -
Dod01g1813 438 Gene3D - 13 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1813 Dod-Chr1 52534247 52537996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1813 17 436 Monolignol Biosynthesis Gene Families AT5G48930 33.793 1.58e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1813 K15400 - gmx:100792433 796.964