Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1805 ATGTTTAAGGAGCTTGAGATGGAAATGGCTAATGGAAATGCTTTCCAACTTAGCGTGAAGCTAAGTGAACCAACTCTAGTTGCTCCTGCGGAGGAAACCAAGAAAGGCATGTACTTCCTATCTAACCTTGACCAGAACATTGCAGTGATTGTCAGAACTGTTTACTGCTTCAAAACGGCTGAGAGAGGGAATGAGAAGGCTGGGGAAGTGCTCAAGAATGCCCTGAAGAAGGTGCTTGTCCACTATTACCCTCTTGCTGGGAGGCTGAGCATCAGCTCAGATGGGAAACTCATAGTGCACTGCACAGGTGAGGGTGCCCTCTTTGTGGAGGCTGAAGCAAACTGCACAATGGAAGAGATAGGTGACCTCACAAAGCCAGACCCAGGGACCCTTGGTAAGCTGGTTTATGACATCCCTGATGCAAAGCACATGCTTCAGATGCCTCCTTTAGTTGCCCAGGTGACCAAGTTTAAGTGTGGAGGCTTTGCTCTTGGGCTGTGCATGAATCACTGCATGTTTGATGGCATTGGTGCCATGGAGTTTGTGAACTCTTGGGGGGAAGTGTCAAGGGACTTGCCACTCTCTATCCCCCCATTTCTAGACAGAAGCATACTCAAGGCTCGCAACCCTCCTAAGATAGAGTACCTTCACCAAGAATTTGCTGACATTGAAGACAAGTCCAGCACCAACACCTTGTATGAAGATGAGATGGTCTACAGGTCCTTCTGCTTTGACCCTGAGAAGCTAAAGCAACTGAAAGCCAAAGCTATGCAAGATGGGGCTCTTCACTCTTGCACAACTTTTGAAGTGCTCTCAGCATTTGTGTGGATAGCTAGAACCAAAGCACTAAAGATGTTGCCAGACCAGCAAACAAAGCTTCTCTTTGCTGTTGATGGAAGGGCTAAGTTCAACCCTCCTCTTCCAAAAGGGTACTGTGGAAATGGGATTGTGCTGACAAATTCTGTGTGTCTAGCAGGTGAACTATCAGAAAAGCCCTTCTCATTTGCTGTGAGTCTCATTCAAGATGCAATCAGGATGGTCACAGACAGTTACATGAGATCAGCTATAGATTACTTTGAGGTCACTAAAGCTAGGCCATCTCTGGCTTGCACACTTTTGATCACAACTTGGTCTAGACTTTCCTTCTACACTACTGATTTTGGATGGGGTGAGCCTGTTGTGTCAGGGCCTGTGTCATTGCCAGAGAAGGAAGTGATCTTGTTCCTTTCTCATGGCATAGAGAGGAGAAACATCAATGTGCTCCTGGGTTTGCCAGCTCCTGTCATGAAGATCTTCCAAGAGTTGATGCAGATATGA 1317 0.4677 MFKELEMEMANGNAFQLSVKLSEPTLVAPAEETKKGMYFLSNLDQNIAVIVRTVYCFKTAERGNEKAGEVLKNALKKVLVHYYPLAGRLSISSDGKLIVHCTGEGALFVEAEANCTMEEIGDLTKPDPGTLGKLVYDIPDAKHMLQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEVSRDLPLSIPPFLDRSILKARNPPKIEYLHQEFADIEDKSSTNTLYEDEMVYRSFCFDPEKLKQLKAKAMQDGALHSCTTFEVLSAFVWIARTKALKMLPDQQTKLLFAVDGRAKFNPPLPKGYCGNGIVLTNSVCLAGELSEKPFSFAVSLIQDAIRMVTDSYMRSAIDYFEVTKARPSLACTLLITTWSRLSFYTTDFGWGEPVVSGPVSLPEKEVILFLSHGIERRNINVLLGLPAPVMKIFQELMQI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1805 438 Pfam Transferase family 18 436 - -
Dod01g1805 438 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 18 437 - -
Dod01g1805 438 Gene3D - 220 437 IPR023213 -
Dod01g1805 438 Gene3D - 13 219 IPR023213 -
Dod01g1805 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1805 Dod-Chr1 52411248 52414997 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1805 17 436 Monolignol Biosynthesis Gene Families AT5G48930 34.023 2.15e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1805 K15400 - gmx:100792433 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1805 01 52411248 52414997 Dod01g1805 01 52411248 52414997 ECH