Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1800 ATGCCAGCCCTTTGTGCAGCAAGGATCTTCCAGTTGACCAGGGAATTGGGCCACAAATCTGATGGGGAAACAATCCAGTGGCTCCTGCAGCAGGCTGAGCCATCCATAATAGCAGCCACTGGGACTGGCACAATCCCTGCATCAGCCCTGGCTGCTGCTGGCAACTCTGTCTCACAGCAGGGGACCTCCCTATCTGCTGGGTTGCACCAAAAGATTGATGAGTTGGGAGGGGGAGGTGGAGGGTCCAGCAGTAGGGCCAGCTGGGCTATGGTTGGAGGGAATTTGGGGAGACCCCATGTGGCCACAGGGCTATGGCCCCATGTCAGTGGATTTGGGTTCCAGTCATCATCTGGTCCATCTACAGCCAGCTTGGGTGGCAGTGAGAGCTCAAATTACCTCCAAAAGATTGGCTTCCCTGGCTTTGACCTGCCTTCTGCCACCAACATGGGGGGGCCTATGAGCTTCACCTCAATCTTGGGTGGGGGTACCCACCAGCAGATGCCTGGTTTGGAGCTTGGTTTGTCACAGGATGGTCATATTGGGGTCCTCAATCCACAGGCCTTGACCCAGATTTATCAGCAGATGGGTCAACCTAGAGTGCACCAGCACCAGCAACAACAGCACCAACAGCAGCCTCCTTCTTCTAAGGATGATTCTCAAGGTTCAGGACAGTAG 675 0.5511 MPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSQQGTSLSAGLHQKIDELGGGGGGSSSRASWAMVGGNLGRPHVATGLWPHVSGFGFQSSSGPSTASLGGSESSNYLQKIGFPGFDLPSATNMGGPMSFTSILGGGTHQQMPGLELGLSQDGHIGVLNPQALTQIYQQMGQPRVHQHQQQQHQQQPPSSKDDSQGSGQ* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1800 224 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 1 223 - -
Dod01g1800 224 ProSiteProfiles TCP domain profile. 1 39 IPR017887 -
Dod01g1800 224 MobiDBLite consensus disorder prediction 194 224 - -
Dod01g1800 224 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 223 IPR005333 GO:0003700
Dod01g1800 224 Pfam TCP family transcription factor 1 76 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1800 Dod-Chr1 52302118 52302792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1800 1 224 TCP Transcription Factor Family AT3G27010 58.547 2.71e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod01g1800 TCP 9.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1800 - - jre:108987051 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1800 01 52302118 52302792 Dod01g1800 01 52302118 52302792 ECH