Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1794 ATGGAGAACTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCTTCTTCTTCAGGCTACCCAATTTCAACGAGTGGTTTGGGAAGCTCTCAGCATGGTTTTGATGGTTTGAATAATGGTCAAAGCTCCAATGCATTCCTGGGCTTGAGGCCTGGGGATCATGAAAGTAGTGATCATGATAAGAGATCAGCAGAAGCTTCTGGAGATGGCATGTTGCCTCAGTCTCAGATGAATGAGAGCATTAATGTGACTGATCAGCTAGGTGGTTCAAGTAACAAAAAGAAAGGGGAGAAGAAGGTTAGGAAGCCTAGATATGCTTTCCAAACGAGGAGCCAAGTTGATATACTTGATGATGGCTATAGGTGGAGGAAGTATGGCCAAAAAGCTGTTAAAGCCAACAAATTCCCAAGGAGCTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTTCAACGCCTAACCAAAGATGAGGGTGTAGTGGTGACCACTTATGAGGGAGTGCACACTCACCCAATTGAGAAGACAACGGACAACTTTGAGCACATTTTGAGTCAGATGCAAATCTACACTCCCTTTTGA 585 0.4462 MENYSMLFPCPPSSSSSGYPISTSGLGSSQHGFDGLNNGQSSNAFLGLRPGDHESSDHDKRSAEASGDGMLPQSQMNESINVTDQLGGSSNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKANKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1794 194 Pfam WRKY DNA -binding domain 116 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1794 194 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 190 IPR044810 GO:0003700
Dod01g1794 194 MobiDBLite consensus disorder prediction 68 89 - -
Dod01g1794 194 Gene3D WRKY domain 99 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1794 194 SMART WRKY_cls 115 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1794 194 MobiDBLite consensus disorder prediction 8 45 - -
Dod01g1794 194 MobiDBLite consensus disorder prediction 51 65 - -
Dod01g1794 194 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 81 190 - -
Dod01g1794 194 MobiDBLite consensus disorder prediction 1 102 - -
Dod01g1794 194 SUPERFAMILY WRKY DNA-binding domain 107 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1794 194 ProSiteProfiles WRKY domain profile. 110 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1794 Dod-Chr1 52052239 52054877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1794 103 194 WRKY Transcription Factor Family AT5G13080 86.957 8.22e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g1794 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1794 - - pvu:PHAVU_001G088200g 280.796