Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1781 ATGGCGATGGATGTGGAGCACAATTTCCAATCAGACTTTTCCTACTGGAAACCTCTTCCTCGCAGGTTCGGCCCCGACTCTCCTTTCTTCGCTTCCGGCAACCTCGAACGGGAACTACTCGCCAAACAGGTTGCTTTGGATTTAACAGAAGAGAAGCAACAGCATGAGAGTTGGATACACGACGAAGACAGGGAAGTCTTTTGTCCCATTGTTGGTTGTGGAACACGCTTGACTTCTATCGAGGACTTTGAAAATCACTATAATGCCAGGCATGCTGCATCTTGTTCAGTGTGTTCTAGAGTTTACCCAACTTCACGTCTGCTCAGCATACATGTATCTGAAGCTCATGATTCTTTCTTTAAGGCGAAAGTTGCACGCGGCTATGATGTGTATGAATGCTTAGTGGAAGGCTGTGGTTTGAAATTCAAAAGCTACAATAGTAGGCAGCAGCATCTGGTTGACAAGCATAAGTTCCCCACCTCATTTGAGTTTTTCAAGAAGGCTAGGCCATCAAAGAAACAGAGGCAAAAGTCTCAACGCAAACAAGCTGTTCATAAGGAGGAAGCTTCAGGAATGATGGAAGTAGAAAATGCAGCCATGGATGACCTTGTTTCAGCAGTCTCTAAACTGAGCACTTCTGACTCCTCCCCTTCATCTATTAGCTTTGGTCGCCGCCACAGAGGCTTGACACTTGTCCCTCGGGCTGTTCAGCGTGGAGGTGGTTCAAACCCATAG 735 0.4667 MAMDVEHNFQSDFSYWKPLPRRFGPDSPFFASGNLERELLAKQVALDLTEEKQQHESWIHDEDREVFCPIVGCGTRLTSIEDFENHYNARHAASCSVCSRVYPTSRLLSIHVSEAHDSFFKAKVARGYDVYECLVEGCGLKFKSYNSRQQHLVDKHKFPTSFEFFKKARPSKKQRQKSQRKQAVHKEEASGMMEVENAAMDDLVSAVSKLSTSDSSPSSISFGRRHRGLTLVPRAVQRGGGSNP* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1781 244 MobiDBLite consensus disorder prediction 167 192 - -
Dod01g1781 244 MobiDBLite consensus disorder prediction 207 223 - -
Dod01g1781 244 ProSitePatterns Zinc finger C2H2 type domain signature. 133 156 IPR013087 -
Dod01g1781 244 MobiDBLite consensus disorder prediction 207 244 - -
Dod01g1781 244 SMART c2h2final6 66 91 IPR013087 -
Dod01g1781 244 SMART c2h2final6 131 156 IPR013087 -
Dod01g1781 244 SMART c2h2final6 93 116 IPR013087 -
Dod01g1781 244 ProSitePatterns Zinc finger C2H2 type domain signature. 95 116 IPR013087 -
Dod01g1781 244 PANTHER UNCHARACTERIZED 10 238 IPR039258 -
Dod01g1781 244 PANTHER ZINC FINGER PROTEIN 511 10 238 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1781 2 238 C2H2 Transcription Factor Family AT5G14140 63.563 2.95e-111 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod01g1781 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1781 - - gmx:100819557 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1781 01 51693829 51696339 Dod01g1781 01 51693829 51696339 ECH