Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1772 ATGAAGGTGTTTAATATAAATGGGACCACCCTTTCTCTTGCACTCTACTCTGATGTCAGCAATTCCAAGGAACTCCTGGAAAGTATGCAAGCTGGGACAATGGAGCCAGAAGTTGCATTCCTCAATGCTTTACTTATTCCAGATGTTTTCCCTATTCTAGCTGCTGCTCACAAGACCCTTGTAGCCAAGTCACGTGACTCTTTGACCACGCGTACTCTTCATTCAGAGCTTGTTTACAATTACTCAGGGTCCAAACATCGAGCATATCCTGTTCATCACTATGCTTGCTTTCTACAGCGTCACACGCAACGCTTTTACTATCTTCGGTCAATGTTTGATCGCCTTGAGGAAATGAGAGTCAAAAGGCATGACTCTGAGCAGTGGAAAAAAGTTTCTTTGTTTGCCAACATAGATGATTTCCTGAAGCCTTGTTTGTACACTAAAAACACTTACATCGTTCGGGAATGGGATCCAATCAATGAGCCTTCTGAAACCATCACTCTTGCCCGCCCCAACCCCACCACTTATCTCTTTCTCGCTCGCGCAGACAGAAACCCTTCTCCTTATTTCCTCAAACATAAGCCAACCCATCACTCCAACATATCCAAATCTCATTCCCCTTCCCTCTATGATGCAGTGCCTGGGCAAGTGTGCAAATCTGCAACTGAAAAAACCAAGTACTTCAAGATCGCTGTAGTGAGAAGCTAA 708 0.4435 MKVFNINGTTLSLALYSDVSNSKELLESMQAGTMEPEVAFLNALLIPDVFPILAAAHKTLVAKSRDSLTTRTLHSELVYNYSGSKHRAYPVHHYACFLQRHTQRFYYLRSMFDRLEEMRVKRHDSEQWKKVSLFANIDDFLKPCLYTKNTYIVREWDPINEPSETITLARPNPTTYLFLARADRNPSPYFLKHKPTHHSNISKSHSPSLYDAVPGQVCKSATEKTKYFKIAVVRS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1772 235 Pfam Kinase binding protein CGI-121 16 86 IPR013926 -
Dod01g1772 235 Gene3D CGI121/TPRKB 1 88 IPR036504 -
Dod01g1772 235 PANTHER CGI-121 FAMILY MEMBER 4 86 IPR013926 -
Dod01g1772 235 SUPERFAMILY PF0523-like 6 86 IPR036504 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1772 Dod-Chr1 51568560 51588035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1772 107 161 Ion Channels AT4G30560 30.769 4.50e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1772 K15901 - gmx:100527714 160.614