Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1765 ATGCTGGCGCGCGGGGCATTTGAGATTCAGAAAGAAAGCAAAAGAGGCAAAATGGCGGGAGAGAATACCATGAAGCAAAGGCAAGGCACAAATCCATGGCCCACCCCTCCTCCTCCTTCTCCGTCGCTGAAATCGAAAATGGAGGAACCGAAGGAAAAATGCTGGAGAATGGAAGTGGACGAGAACCTGAAGCGCCTCCAGTCCCTCCTGTTCGGCGCCGACATCGCCCTCGACAAGCAGGACTTCCCCTCCGCCTACGTGCTCGGCCTCCGCCTCCTCGGCTTCCTCGACTCCCACTCCGACGTCGACGAAGCCTTCCTCCATCCCATCCGCCGCGATGCCCTCTCCAGGCTCGCCTCCGCTCGCCGTTCCCTCATCCCCGATTCTGATCGCCTAGCTTTTGAACAAGCGAAGAAGCTTCCGGGACGCGTTTTTGCCACGTCGGGTGATATTGACGTTGACAAGATCCGCAAGTCGAAGTACTTTCGAGCTCTTCTCGTGCAATCTGATGAAAACGACGAGAACCAGTTGGTTGATCAACTGGGGAAGCAAGAGAAAAAGTTTGGCAACGGGTCAAAGGAAATGGTGCAAGCAAAGCTGACATCGGTGTATGTCAAGAGCACCTTGAGAACTGATAATGCTACCAAGAGCATTTCTAATTTGAAGGATAACGGATCTGAGGACTGCGTGGTTGTTGAGAGGCCTCAATCACATGCTGGCAATACGAAGAGTCCTGCTATTTCTTCTTTCTCGCAAGTTGAAGAGGAAGAAAGAATGTCTGGAAACACATTTGGGAAGAAGCGAGTGCATTTGGAACTTAATAGTCCGAAAGTTGGTTATGTGAAGTCGCCTTCAAGCAAGGATGAAGTTAACCCTGATGTCTGCGGCAATGGTTTTGTTACTGCTAGAGCCAAATTGGAAATGGAAGCAAGGCAAAGGAAAGGATCAATTGGTTCACCCAGCACACCTGTACCTCCACAATGCGACAACAATCCTGCCAATAGGTTATATGGTGGGAGATCATATGGCGTTTTGCGACGTGGCTTCCGTGGTAATTTTGTTCCCCCTATTAAATCCAATGGGAACAATGTTGGAAATATGACTTCACGAATTGCTGGAAAGTGCGATGATGCTTTAGATGACTCTACAAAGAGATGCTTGGAAATGCTATGCGGGCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATTGAACATGTTAGTAATGAGATTATGGATAGAGATCCTAATGTCCGATGGGATGACATTGCCGGATTGGAGCATGCCAAGAAATGTGTCACTGAAATGGTTATATGGCCTCTGTTACGTCCTGACATATTTAAGGGATGCCGGTCACCTGGGAGAGGTCTGCTCCTATTTGGTCCACCGGGAACTGGTAAAACCATGATAGGTAAAGCCATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATATCTGCCAGTTCATTGACAAGCAAGTGGATTGGTGAAGGCGAAAAGCTAGTAAGAGCCCTTTTTGGGGTTGCCAGTTGTCGTCAACCAGCTGTAATTTTTGTTGATGAGATAGATTCGCTCCTGTCTCAGCGTAAGTCAGAGGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAATTTCTCATAGAAATGGAAGGCTTTGACAGTGGTAGCGAACAAATTCTGCTTATAGGGGCAACAAATCGTCCCCAAGAGCTTGATGAAGCAGCACGAAGGAGACTTACTAAAAGACTTTATATCCCCTTACCCTCTTCAGAGGCTAGAGCTTGGATTGTACGTAACCTACTAGAGAAGGATGGATTATTCAAGCTATCAAAGGAGGAAATAGATATCATATGTAACTTGACGGAAGGTTATTCAGGATCTGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGTCCCCTAAGAGAGGCTTTAAGACAAGGTATAGAAATTACAAAGTTGAAAAAGGAGGATATGCGGCCTGTAACCCTTCAGGACTTCGAGAATGCCCTGAAAGAAGTGAGGCCTTCTGTTTCCACAAGCGAGCTTGGCACTTACGATGAATGGAACAAGCAGTTCGGAAGCCTATCACTGTAG 2112 0.4744 MLARGAFEIQKESKRGKMAGENTMKQRQGTNPWPTPPPPSPSLKSKMEEPKEKCWRMEVDENLKRLQSLLFGADIALDKQDFPSAYVLGLRLLGFLDSHSDVDEAFLHPIRRDALSRLASARRSLIPDSDRLAFEQAKKLPGRVFATSGDIDVDKIRKSKYFRALLVQSDENDENQLVDQLGKQEKKFGNGSKEMVQAKLTSVYVKSTLRTDNATKSISNLKDNGSEDCVVVERPQSHAGNTKSPAISSFSQVEEEERMSGNTFGKKRVHLELNSPKVGYVKSPSSKDEVNPDVCGNGFVTARAKLEMEARQRKGSIGSPSTPVPPQCDNNPANRLYGGRSYGVLRRGFRGNFVPPIKSNGNNVGNMTSRIAGKCDDALDDSTKRCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSKEEIDIICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITKLKKEDMRPVTLQDFENALKEVRPSVSTSELGTYDEWNKQFGSLSL* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1765 703 MobiDBLite consensus disorder prediction 237 258 - -
Dod01g1765 703 MobiDBLite consensus disorder prediction 314 333 - -
Dod01g1765 703 MobiDBLite consensus disorder prediction 235 262 - -
Dod01g1765 703 SMART AAA_5 458 594 IPR003593 -
Dod01g1765 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 698 IPR027417 -
Dod01g1765 703 PANTHER AAA DOMAIN-CONTAINING 109 700 - -
Dod01g1765 703 PANTHER FIDGETIN-LIKE PROTEIN 1 109 700 - -
Dod01g1765 703 Gene3D - 421 695 IPR027417 -
Dod01g1765 703 CDD AAA 455 592 - -
Dod01g1765 703 MobiDBLite consensus disorder prediction 1 51 - -
Dod01g1765 703 Pfam Vps4 C terminal oligomerisation domain 665 699 IPR015415 -
Dod01g1765 703 Pfam ATPase family associated with various cellular activities (AAA) 462 592 IPR003959 GO:0005524|GO:0016887
Dod01g1765 703 ProSitePatterns AAA-protein family signature. 564 583 IPR003960 GO:0005524|GO:0016887
Dod01g1765 703 Gene3D - 593 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1765 Dod-Chr1 51427167 51434745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1765 377 701 Calmodulin-binding Proteins AT3G56690 31.343 2.05e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1765 K22766 - gmx:100776024 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1765 01 51427167 51434745 Dod01g1765 01 51427167 51434745 ECH