Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1760 ATGCCTCCCAGAAAGAAACCCAACTCTTCTTCATCTTCCTCTTCTTCTTCCAAGAAGCCCAACCCTCAACCTTCCAAGTTCGGCATCCAGCACTTCTTCGACCGCCACGCTTCCCAAAAGCTGCAAACCAACAATGCAACTCCCAATGCTTCCCATTCTGATCCTCTCCAAGCCCGAACAAATGACCCGACTTCCAGAACGTCTGTTCAGGGGGTTGCCAACGCCGCATCGCAAAAACCTAACGAAAGTGAGAGTAGTAATAATAATGATGATAGTAAAAAATGTAACTATCCACCTTCGCAGGATACTCCTACGGAGAATTCGGTGTTGCCGGTCACTACTGATGTGGCGGATAGCATCTCTGAGGTGTCTCCAGAGATTTCCAAGTCTCTGTCGCTTAAGCGCTTCAAGTTCTCCCCTGGAATGTTTATAAAGCAGAGCCAGGATGATGGGGTTGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGACTCCAAGCAGTTTCTAAACACATGCCAAATATTATAAAAGCATTGGCCGACTCTTCAAGAATCAACTTATTGCCAATTCGTAGCTGCTCGGAAGATAAGACTTCTCTAGATAAAGATGGCAAGGTTGAAAAGTTGTTTACTTCACCAACTCCCAAGGCTTCAGCAAAAGCTCTGGCTTCAGGGGATAAATCCGGCTTGAAAAGGGTAAACCCAGATCAAGGCACGGATTTTAATATCAATGCAACTACTGTGAGTTACTCTGGAGTAGCTGGTGGACAGAGTCCCTTCAGAACCCCACCATCTTTGTCTTGTTGCCCTGATAAGCTCGTCAAGGATATTGAATGCAGTGGACCATCAGACCAACTTTATTTAAGACAGCACAAAAAGGCATTGCTTGAATTGTTAGATCAAGTTGAAGACGCGATTGCTGTTGATGATGCTACAGTGTGTAACAAAGTTACTTATTCATCTAAATCTCAAGATGGAATTGCCGATGAGCTTCCTGTTAAAGCCAACCTTGCTATAGAAAGGACAAGATCACATGTATCTAAAGAGGTGGTTGGTGTCTTCTCTAGTTGTAATTATTTGGTTTTGGAGGTGCTTGAAAATTGTAGGTCTGCTGATTCATCTGCTGCTGATGCTCAATCCTCATACAAGGTGCTTCGTATACTAAACGAGCAAACTGGAGAAGAGCAAGCAGTAAACTTGTGGGATGAGTGGTCTTACAGTGTAATTGCACCTGGAGATACTGTGAACATAATCGGTCAATTTGATGAAGGGGGAAGTTATGATATTGGTCACGATAACAATTTCTTGATTGTCCACCCAGACATTCTGGTGTCTGGAACAAGGGTTGCTGCCAGTTTTAGTTGCCCTAGGAGAACTGTCTTAGATGAGAGGCTAAAATACAATGAATACTCTACTGCAGCATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTTACGAATGAAAATCCAACAATAAACTTCTTGGAAGATTATGCAGAAGTGGTATTGCTGAGGAACATTGAAAGTTTGTGTGCTTGTGGAGTAAATGAAAACGATGTTCGCAAAACCTTGATTGATGCTATCCCGAGAATATTCAATTGGATCTTACTCTTCAAAAATAAGGAGGAAAGAAAAAATCCTAATGTTAATTTTGGATTTGTTGATGGGCCAAAGAAAATTGGCATATCTGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCTGTCAGAGTGAAAGTTCAATCATTAAAAGATGAACTAGAGGAGAAGATTATGCCTGTAGAGTTTAAAACCGGGAAATCACCAACTAGCCAGTCTTCAGCAGAACATAATGCCCAAGTAATCTTGTACACTCTCTTGATGTCTGAAAGGTACCAGCAGACTATTGATTCTGGTCTTTTATATTATCTCCAATCAGATCAGACACAGGGCATTGCGGTTCAAAGATCTGATTTAGTTGGCCTAATAATGCGACGCAACGAGCTAGCAAGTGATATTCTTAAGGCATTAACCTTGCAACAACTGCCACCAATGTTACAGAGTCCTAGCATTTGCAGAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACAAGGCACATGGTGGAAGCATAGAAAGCAGTGGATTGGGAGATGTATTTGATTCTCATACTAATCACCTTACATCTTCCTATTCTAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTAGAAGCTAAGGAGACCGAGCTTTTAAAGAAAGAGGTGTGGCGATCACATAGTTTAAAGATTCCAAACAATGGTGGCCTTTCTTCTATTGTTCTCGATGTTTCGAATGGATTTCCTCATCAAAAATCAGTCAAAGATAATCGTTTTGTTTATCGTTTTGTAAGACAAGATACTTCTTGTTCCTTTGAAGTTTCTGATGGTGATCATTCGAGTACCACTTCATCAAATTTAGATCTCACACTTGGAGTTGGAGACTATGTGATATTGAGTAATGAATCTAGCCGGCAAACTATTGCAAAAGGGATGATCTCTGACATTAGCCACATTCATGTATCTGTTTCCTTTTCAAAACGCTTACGAATTCCTGGAAGATCTTCCACTACACATGATCTCCTTCAACAAGTTTGGAGAATTGACAAGGATGAAGTTGTGACTTTATTTGCAATTATGAGGTTTAATCTTGTCCAACTTTTTCTACAAAATGATCAAAGTGCTCATCTGCGGAGAATGATCGTTGACCTTGAGGCTCCTAGGTTTGACAGTGGATCTATAGTAAGCCAGGATCCAGCAATATCCTATGTTTGGTCAGAGAAGAGTTTGAATGATGATCAACGTAGAGCAATTATCAAGATACTCGCAGCAAAAGATTATGCACTTATATTAGGAATGCCTGGGACAGGGAAGACTTCCACTATGGTTCATGCTGTGAAAGCCTTGTTGATTAGGGGCTCTTCCATTTTGCTGACATGCCTATACAAACTCTGCTGTTGA 3027 0.4116 MPPRKKPNSSSSSSSSSKKPNPQPSKFGIQHFFDRHASQKLQTNNATPNASHSDPLQARTNDPTSRTSVQGVANAASQKPNESESSNNNDDSKKCNYPPSQDTPTENSVLPVTTDVADSISEVSPEISKSLSLKRFKFSPGMFIKQSQDDGVDEVTWKISPVNERLQAVSKHMPNIIKALADSSRINLLPIRSCSEDKTSLDKDGKVEKLFTSPTPKASAKALASGDKSGLKRVNPDQGTDFNINATTVSYSGVAGGQSPFRTPPSLSCCPDKLVKDIECSGPSDQLYLRQHKKALLELLDQVEDAIAVDDATVCNKVTYSSKSQDGIADELPVKANLAIERTRSHVSKEVVGVFSSCNYLVLEVLENCRSADSSAADAQSSYKVLRILNEQTGEEQAVNLWDEWSYSVIAPGDTVNIIGQFDEGGSYDIGHDNNFLIVHPDILVSGTRVAASFSCPRRTVLDERLKYNEYSTAALTGTLLHQIFQAGLTNENPTINFLEDYAEVVLLRNIESLCACGVNENDVRKTLIDAIPRIFNWILLFKNKEERKNPNVNFGFVDGPKKIGISEVIDIEEMAWAPKYGLKGMIDASVRVKVQSLKDELEEKIMPVEFKTGKSPTSQSSAEHNAQVILYTLLMSERYQQTIDSGLLYYLQSDQTQGIAVQRSDLVGLIMRRNELASDILKALTLQQLPPMLQSPSICRGCRHLNVCSIYHKAHGGSIESSGLGDVFDSHTNHLTSSYSKFLCHWDRLIDLEAKETELLKKEVWRSHSLKIPNNGGLSSIVLDVSNGFPHQKSVKDNRFVYRFVRQDTSCSFEVSDGDHSSTTSSNLDLTLGVGDYVILSNESSRQTIAKGMISDISHIHVSVSFSKRLRIPGRSSTTHDLLQQVWRIDKDEVVTLFAIMRFNLVQLFLQNDQSAHLRRMIVDLEAPRFDSGSIVSQDPAISYVWSEKSLNDDQRRAIIKILAAKDYALILGMPGTGKTSTMVHAVKALLIRGSSILLTCLYKLCC* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1760 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1002 IPR027417 -
Dod01g1760 1008 Gene3D - 894 1001 IPR027417 -
Dod01g1760 1008 Gene3D - 446 710 IPR011604 -
Dod01g1760 1008 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 2 1001 - -
Dod01g1760 1008 Pfam Domain of unknown function DUF83 594 710 IPR022765 -
Dod01g1760 1008 Pfam DNA replication factor Dna2 391 593 IPR014808 -
Dod01g1760 1008 Gene3D - 830 893 - -
Dod01g1760 1008 PANTHER DNA2/NAM7 HELICASE FAMILY 2 1001 IPR045055 -
Dod01g1760 1008 MobiDBLite consensus disorder prediction 7 24 - -
Dod01g1760 1008 MobiDBLite consensus disorder prediction 36 109 - -
Dod01g1760 1008 MobiDBLite consensus disorder prediction 1 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1760 1 1000 Core DNA Replication Machinery Family AT1G08840 53.603 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1760 K10742 - gmx:100799415 1212.59