Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1759 ATGAAACTTAAAGCACAGGGCATTGATTTTGTCCGCTTTGGAAGATCAGAAGCAGTGCATGAGGAGGTCAGAGGACAATGCATTTCAGTGTTTGTACTTGTTGGGGATCATTATCAGTTGCCTCCACTTGTCCAGAGTACAGAGGCCCGAGAGAATGGCATGGGGATAAGCTTGTTTTGTAGGCTCTCAGAAGCACATCCGCAGGCAATCTCAGCATTACAGAGCCAGTACCGGATGTGTCAAGGCATTATGGACCTGTCAAATGTCTTGATATATGGTGACAGGTTGAGGTGTGGTTCATCTGAGGTCGCTAATGCCAAACTTGAGTTCCCTGATTTAAAGTGTGGTTTGCCTTGGCTAGAAGACGTTTTGAATCCGGGCAGGCCAGTGATTTTTATTGATACTGACGAGCTACCTGCTTTGGAGGAAAGAGATCAGAAGACTATTAATAATCCAGCTGAAGCTCACATAATTGCCGAGGTTGCAAAGGAATTGGTCAAAAAGGGAATTGTAGAAGAGAACATTGGCATTATTACCCCTTATAACTCCCAGGCAAAGCTCATCCGGAATGCCGCTTCATTGACTTCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAGGATTGCATGTTAATATCTTTTGTAAGGTCTAGTGAAATCCCAACAAGCATTGCTGCTTCTCTGCTTGGAGATTGGCACAGGATAAATGTGGCTCTCACTCGTGCTAAGAAAAAGTTGATCATGGTGGGGTCTCGTAGAACTCTATCAAAGGTTCTACTCCTGAAGTTTCTCATTAAGAGCGTTGAGGAGCAATGTGGAATTATAAGCGTTTCTAAGAAGGATATCTGTCCAAAGAGTGGGCTCCAAAGATGTTCCCAAATGAGATGA 897 0.4381 MKLKAQGIDFVRFGRSEAVHEEVRGQCISVFVLVGDHYQLPPLVQSTEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNVLIYGDRLRCGSSEVANAKLEFPDLKCGLPWLEDVLNPGRPVIFIDTDELPALEERDQKTINNPAEAHIIAEVAKELVKKGIVEENIGIITPYNSQAKLIRNAASLTSLEIHTIDKYQGRDKDCMLISFVRSSEIPTSIAASLLGDWHRINVALTRAKKKLIMVGSRRTLSKVLLLKFLIKSVEEQCGIISVSKKDICPKSGLQRCSQMR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1759 298 CDD SF1_C_Upf1 79 272 IPR041679 -
Dod01g1759 298 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 31 273 IPR026851 GO:0017108|GO:0017116|GO:0033567
Dod01g1759 298 Pfam AAA domain 56 255 IPR041679 -
Dod01g1759 298 Gene3D - 26 76 IPR027417 -
Dod01g1759 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 262 IPR027417 -
Dod01g1759 298 PANTHER DNA2/NAM7 HELICASE FAMILY 31 273 IPR045055 -
Dod01g1759 298 Gene3D - 77 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1759 Dod-Chr1 51303073 51316521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1759 1 31 Core DNA Replication Machinery Family AT1G08840 67.742 7.44e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1759 K10742 - gmx:100799415 447.588