Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1755 ATGCCAGAGGAAACGACGTCGATCGACTATGTCATGGAGGCAGCGTCGGGGCCACACTTCTCCGGCCTCCGCCTCGACGGCCTCCTCTCGTCGCCGCCTTCCTCCTCCACCTCCTCTCCCGCGCACTGTTTCCCCGATCCCTCCTCCTCCCTCGCCCGCGATTCCCTCCCCAACCAGCCCTTCGTCATTGGTGTTTCGGGAGGTACTGCTTCTGGTAAGACCACCGTATGCGACATGATCATTCAGCAGCTTCACGATCACCGCGTTGTGCTCGTTAATCAGGATTCGTTTTACCGTGGTTTGGGGCCTGAAGAGTTGGAGCGTGTTCACGAGTACAATTTTGATCATCCTGATGCTTTTGATACTGAGCAGCTACTAGAGTGCATGAAAAAGCTCATCGCTGGCCAGAGTGTACAAGTCCCAGTTTATGACTTCAAGAAGCACCAACGGTCTTTGGACAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAAGGGATTCTTGTATTCCATGATCAGAATGTCCGGGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTAGCTCGCAGGATTAGACGTGACACAGTGGAGAGAGGCAGGGATATAAACTCTGTCCTTGAGCAGTATGCGAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCATCAAAGAAGTATGCTGATGTGATCATTCCACGTGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTGTGCATAATATATCCAAATGTCTACGTTATTCAGTCAACATTCCAGATAAGAGGAATGCATACATTGATTCGTGACCGAGACATATCAAAACATGATTTTGTATTTTATTCTGATCGACTTATACGTCTGGTTGTTGAGCATGGTCTAGGTTATCTCCCATTCACTGAAAAGCAAGTGGTTACTCCAACAGGATCTGTATACACCGGTGTTGATTTCTGCAAGAAATTATGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTTTGATTCATCGCGATGGTGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCGGAAAGGCATGTCTTGCTTCTTGACCCTGTCCTTGCTACAGGCAACTCTGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTCCCAGAGTCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAAGGAATCCATTGTGTGTGTAAAAGGTTTCCATCGCTAAAAATTGTAACATCTGAGATTGATGCTGCACTAAATGAGGAGTTCCGTGTTATACCCGGATTGGGTGAGTTTGGTGATCGTTACTTTGGTACTGATGATTGA 1446 0.455 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSTSSPAHCFPDPSSSLARDSLPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLGPEELERVHEYNFDHPDAFDTEQLLECMKKLIAGQSVQVPVYDFKKHQRSLDSFRQVNASDVIILEGILVFHDQNVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCIIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGYLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNEEFRVIPGLGEFGDRYFGTDD* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1755 481 PANTHER URIDINE KINASE 16 478 - -
Dod01g1755 481 TIGRFAM udk: uridine kinase 60 260 IPR000764 -
Dod01g1755 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 253 IPR027417 -
Dod01g1755 481 MobiDBLite consensus disorder prediction 28 50 - -
Dod01g1755 481 Pfam Uracil phosphoribosyltransferase 278 479 - -
Dod01g1755 481 MobiDBLite consensus disorder prediction 25 50 - -
Dod01g1755 481 Pfam Phosphoribulokinase / Uridine kinase family 62 248 IPR006083 GO:0005524|GO:0016301
Dod01g1755 481 Gene3D - 264 479 IPR029057 -
Dod01g1755 481 CDD UMPK 62 260 IPR000764 -
Dod01g1755 481 Gene3D - 57 263 IPR027417 -
Dod01g1755 481 SUPERFAMILY PRTase-like 268 480 IPR029057 -
Dod01g1755 481 PRINTS Uridine kinase signature 228 241 - -
Dod01g1755 481 PRINTS Uridine kinase signature 206 217 - -
Dod01g1755 481 PRINTS Uridine kinase signature 135 150 - -
Dod01g1755 481 PRINTS Uridine kinase signature 60 77 - -
Dod01g1755 481 PRINTS Uridine kinase signature 90 101 - -
Dod01g1755 481 PRINTS Uridine kinase signature 192 202 - -
Dod01g1755 481 CDD PRTases_typeI 337 452 IPR000836 -
Dod01g1755 481 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 16 478 IPR029930 GO:0004849|GO:0044206
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1755 Dod-Chr1 51201038 51214327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1755 1 481 PRT Gene Family AT3G27190 86.335 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1755 K00876 - gmx:100780005 864.374