Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1740 ATGGGATACTTTTGCTTTTATCTTTCTTTTGTAGCTCTTTCCTGGTTTTTTTTCATCCCTAGCACCCATGAACTGCAAGCTGCTCAGACCCAAGTCTTGTTACAGATAAGGAAGTACCTGGAGTACCCTACCTCATTGCAAGTCTGGGAAAATTACAATGATGACCTTTGTGGGATTCCTTTATCTTCTCATATGAGCATTAAGTGTGAGGGTAATTCGGTAACTGAGCTCAAAATTATGGGAGATAAACCTGTGATGGTTGACAAATTCAATGGACTTGCAGTTCCCAATGTTACACTATCCATGAGCTTCTCTATTGATTCTTTTGTCACCACATTAACAAGGTTAGCCAGCTTAAGGGTCCTTAGCTTGGTTTCCTTGGGGATTTGGGGTCCACTTCCTGATAAGATTCATAGGTTGTCTTTGCTTGAAGTCTTGGACTTGAGCTCAAATTTCTTGTTTGGTTCTATCCCTCCAAGAATAGCTACAATGGTAAAGCTTCATACACTAACACTTGATGGCAATTACTTTAACAGCACTATGCCTAATTGGTTTGGCTCATTGTCTAATCTAACTGTTTTGAGTTTTAAAAACAACCACTTAAGGGGTTCATTCCCCTCCTCACTATGCAAAATTAAGTCCCTTACTTGTATTTCTTTGTCCCACAATGAGCTGTCTGGTGGATTACCTGATCTTAGTGCTCTCACTGGCCTGCATGTGCTGGATTTAAGAGAGAATCATTTCGATTCTAAGCTACCATCATTGCCAAAAGAAGTAGTCACAGTTCTTCTAAGCAAAAACTCGTTCTCAGGCAAGATACCTAGTCAGTTTGGTGAATTGGGACAGCTTCAACATCTAGACCTTTCATCAAATCATCTCACCAGGATACCCCCATCTGCATTGTTCTCTTTGCCAAACATGAGTTACTTGAATTTAGCAAGCAATGTGCTAAGTGGTTCCCTTCCAGACAAGCTAAGATGTGGCAATAAGCTTGGTTTTGTGGATATTTCCAGTAACAAGTTGAATGGTGGACTCCCTTCTTGCTTGACCGATACATCTGATCGAAGAGTCGTCGAGTATGGTGGAAACTGTTTATCTGTTCATTCTCAAACTCAGCGTCGAGGGTCTTATTGTAAAGAATCCAGTTCAGGATGGAAGAAATATTGGAGATGGAAAATAGCTATGGCAGTTGCCATCATTATTGTAGTTGTTCTTGTGCTTTTAGCTCTTGGAGTTTTCCTTTATAGAAAATATTACTCAAGGGCGAATTTTGAGCATGAGGTGTTGCCAAAGGTTGCCCAAGATAACTCAACAACCGGGGTCTCCTCTGAAATCCTTACTAGTGCCAGATTCATTTCTCAAGCAGTGAAGCGAGGGACACAAGCTACTCCAGCCTGTCGACAGTTTTCAATTGAAGAGTTGAAGGAAGTCACAAAAAACTTTGACTTGTCAACTTGTATTGGTGAAGGCTCCATAGGGAAGTTGTACAAAGCTAAACTAGAGAATGGACCCTATGTGGTGATACGTTCTGTGACTTTATCAAAGAAATGCTCAATACAAAACCTCAAAGCTCGGTTGGATTTACTCTCAAAGTTCCACCATCCAAATTTGGTTAGCCTATTGGGTCATTGTATTGACAGTGGGGGACCAGATGATTCTAGTACTCACAAACTTCATCTTGTTTATGAGTATGTGCCAAATGGGAATTATGGTAGCCATCTGTCAGAGTTTTCACCTGAGAAGGCACTAAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCTGTCCATTTTCTACATACTGGTGTGATACCTGGTTGCTTTGGAAACCAGTTAAAGACAAACAATGTCTTACTTGATGAGCATCACATTCCCAAACTAAGTGACTATGGTATGTCCATCATTGCTGAAGAGATCGAAAAGCATGAGGCAAAGGAAGAGAATCCAAAGTCATGGCAAAGCACAAATTTAGATGATGATGTTTATCATTTTGGATTCATACTGTTTGAATCACTTGTTGGACCCATACCAAGTGATAATAGCGAAGCATTTTTTCTTAATGAAAAGGCATCCTTTGGCAGTCAAGATGGCAGAAGAAAAGTTGTGGATCCGGTAGTGTTGACCACTTGCAGTCAAGAGTCATTATCAATTGCAATATCTATCACAACCAAATGCATATCTCCAGAAACCTCATCTCGTCCCTCTTTTGAGGATGTTCTTTGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACTGCAGATGCAGATCAAAAATCAGACTCTATATCATAG 2301 0.4046 MGYFCFYLSFVALSWFFFIPSTHELQAAQTQVLLQIRKYLEYPTSLQVWENYNDDLCGIPLSSHMSIKCEGNSVTELKIMGDKPVMVDKFNGLAVPNVTLSMSFSIDSFVTTLTRLASLRVLSLVSLGIWGPLPDKIHRLSLLEVLDLSSNFLFGSIPPRIATMVKLHTLTLDGNYFNSTMPNWFGSLSNLTVLSFKNNHLRGSFPSSLCKIKSLTCISLSHNELSGGLPDLSALTGLHVLDLRENHFDSKLPSLPKEVVTVLLSKNSFSGKIPSQFGELGQLQHLDLSSNHLTRIPPSALFSLPNMSYLNLASNVLSGSLPDKLRCGNKLGFVDISSNKLNGGLPSCLTDTSDRRVVEYGGNCLSVHSQTQRRGSYCKESSSGWKKYWRWKIAMAVAIIIVVVLVLLALGVFLYRKYYSRANFEHEVLPKVAQDNSTTGVSSEILTSARFISQAVKRGTQATPACRQFSIEELKEVTKNFDLSTCIGEGSIGKLYKAKLENGPYVVIRSVTLSKKCSIQNLKARLDLLSKFHHPNLVSLLGHCIDSGGPDDSSTHKLHLVYEYVPNGNYGSHLSEFSPEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFGNQLKTNNVLLDEHHIPKLSDYGMSIIAEEIEKHEAKEENPKSWQSTNLDDDVYHFGFILFESLVGPIPSDNSEAFFLNEKASFGSQDGRRKVVDPVVLTTCSQESLSIAISITTKCISPETSSRPSFEDVLWNLQYAAQVQATADADQKSDSIS* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1740 766 Pfam Leucine Rich Repeat 143 159 IPR001611 GO:0005515
Dod01g1740 766 PANTHER OS07G0166700 PROTEIN 4 763 IPR045272 GO:0004714|GO:0006468
Dod01g1740 766 Pfam Protein tyrosine and serine/threonine kinase 483 744 IPR001245 GO:0004672|GO:0006468
Dod01g1740 766 Pfam Leucine rich repeat 260 317 IPR001611 GO:0005515
Dod01g1740 766 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Dod01g1740 766 SUPERFAMILY Protein kinase-like (PK-like) 463 746 IPR011009 -
Dod01g1740 766 Gene3D Phosphorylase Kinase; domain 1 427 564 - -
Dod01g1740 766 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 4 763 - -
Dod01g1740 766 ProSiteProfiles Leucine-rich repeat profile. 282 303 IPR001611 GO:0005515
Dod01g1740 766 SMART LRR_typ_2 140 163 IPR003591 -
Dod01g1740 766 SMART LRR_typ_2 280 303 IPR003591 -
Dod01g1740 766 SMART LRR_typ_2 164 187 IPR003591 -
Dod01g1740 766 SMART LRR_typ_2 304 328 IPR003591 -
Dod01g1740 766 SMART LRR_typ_2 235 262 IPR003591 -
Dod01g1740 766 SMART LRR_typ_2 188 212 IPR003591 -
Dod01g1740 766 ProSiteProfiles Protein kinase domain profile. 481 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1740 766 Gene3D Transferase(Phosphotransferase) domain 1 565 765 - -
Dod01g1740 766 Gene3D Ribonuclease Inhibitor 26 258 IPR032675 -
Dod01g1740 766 SUPERFAMILY L domain-like 113 365 - -
Dod01g1740 766 Gene3D Ribonuclease Inhibitor 259 383 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1740 Dod-Chr1 50960469 50967236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1740 8 691 Miscellaneous Gene Families AT5G14210 57.349 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Dod01g1740 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1740 - - gmx:100784640 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1740 01 50960469 50967236 Dod01g1740 01 50960469 50967236 ECH