Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1725 ATGACAGAGTCTTGGTTGCTGCTGGACATTCCACAAATGGGAAAGAATTCTTTCATGTCACGCATTAGCTCCTTCTTTGTCCTGCTATTGTTATTGGCATGGTCAAGGGTACTACTAGCTAATGAAAGAAGGGGACGCTGCTTAAGCACCCCAAGGCCAACTATGAGCATAGGTGTTGTGCTTGATTTGGGTTTACTAATGGGTAAGCAGCAGAAGATAGCCATGGAAATTGCCGTCCAAGAGTTCAATCGGTTGAGTTGCTCTAAGCTGGATTTGAAGGTCAGAAGCTCCCGGGGGAATTCGGCTCAGACGGTTGCTAGCGCTATGGATCTTGCACAGAGCAAGGAAATTCTAGCCATCATAGGAACAATAACACACAGCGAAGCATGCTTGGCAAGTGAAATTAATAGCAACACAAAGAGCGTTCCTATTTTGTCTCTAACTTCACCTGCAGCAAGGACAGAGTTTTCATCTCCTCCATTGCCAAACTTCATCCAAGTGAGCGATGATTTCAGCCTTCACATGCAATGCATTGCAGCCATTGTAGGAGAATTCAGATGGCGAAAAGTGACAGCAATCTATGAACTTAACAACGGGTTTTCTTCTGATCCAGGGGTGCTTATTAGTCTCTCCCATTCTCTTCGGCTTGTTGGTTCAGAGATTGATAACCATTTAGCCTTGCCTTCCTTGTCCTCTCTATCAGACCCAAAATCTAGAATTGAAAACGAGCTTAATAACCTCAAGAGGAAGAGTAACAGGGTATTCTTGATTGTGCACTCTTCCTTAGAGCTAGCCAGCATGCTCTGTGAGAAAGCACAACAAATGGGTATGATGGAAAAAGGTTCTGTATGGGTTATCCCAGATGGGGTTGCTGGCCTTCTTGATTCAGTTAACTCATCAGTTATCTCTAATATGCAAGGTGTTATTGGATTTAAAACACACTTCATGGAAATGAGCGATGCAAATAGAAAGTTCAAGCTCAAATTCCGAAGAAGGTTTGCATCAGAGTACCCTGAAGAAGAGAACATTAACCCAAGTGTCTTCGCATTTCGATCTTATGACGCAACTTGGGCTATTGCTCAGGCTGCAAGGAAATCAAAAGGAAAGTTCAGCCTGAAAGAATTATCAGGGGAGATTATGTTCAGTAAATTTGATGCATTAACTGGAAAGAACGGCTTCACCAATAAAAAGTTACCGCAATCGCCAACCTTCACTATAATTAATGTGATTGGGAAAAGCTACAGAGAAATGGCATTTTGGTCTCCAGCTCTTGGTTTCTCCAAGAACATTGTTAGACGTGAGCTAGTGGAGATAAACAAAAATAATGATTCTAGTGGAGTTTTGAGCACAGTTTATTGGCCTGGAGGCTCACAGTCGGTTCCTAAGGGATGGACTCACAGTAATGAGGAAAGGCCACTGAAAATTGCAGTGCCTGCAAATGGTGCCTTCAAGCAGTTTGTGAATGTTACCTATGATGAGAGCTTGAATGAAACTTACATAAATGGCTTCTCAATTCATGTCTTCAAAGATGCTGTTAAACGTCTTCCTTATCACTTGCCATATGAGTTTGTTCTCTTTAATGGCTCCTATGATGAAATGGTTGAGCAAGTTAGCAACCAGACAGTGGATGCAGCTGTTGGAGATATATCAATTCTGTCATATAGATATCATTTAGTAGAATTCTCACAACCGTACGTCGATTCTGGCCTTGACATGGTGGTTACTGAGAAGCCAGATAAATCAAAACAAACGTGGATGTTTATGGATACCTTTACGAAAGAGATGTGGTTCATGATGGTAGCTATACACATTTTCGTTGGATTGGTCTTTTGGTTGATTGAGAGGGAAGTCAATGAAGAACTGCAAGGGTTTGGGGCCATGATTTGGTTTTTAGTCACTGTAATATTCTTTGCACACAGAGAACCAATAAGAAGCCCCTTGGCTCGATCAGTGCTGGCACCATGGTTATTTGTTATTCTCATCGTAACAAGTAGTTTCACAGCAAGTTTGACATCCATGATGACTATCTCGCAACTTGAGCCATCAGTGTTAGATATCCAGACCCTTCAAAAAAGAAATGCGTCGGTATTTCCAAAGAGTTCTCCTTTGGCCGGTGATATATCCGAGGCATTATTAGGCATTATAGAGAGTGGAGAAACAGAACAACTTGAAAAATATATGCTATCAACTGCAAGTTGCTCTCCAAAAGCAAAAGATGAGTCGCCGTTAGGTTATCAGCCTTTCCTTGGGCTATTTTGCATCTGTGCTGCTGTTGCTGCTCTGGCATTATTGTACATCATGATTTGTTTGGTCGTTAAGAATGTAGGGAACTTGGTGAGGCTCTTAAAAGCTGCACTAACTCAATTAAAGAGAATAGGGAGATGGACAACTGCTAATTTTGCTGGGATATATTCCAAGGTACAATCAAGGAGCATGAGAAGAGTTAGTGCTGCCACAGAAAGAAGAAATGTTGAGGAAACTGTAACTAATAGTGAGCACTTACCCTGTGGTTGTTGA 2517 0.418 MTESWLLLDIPQMGKNSFMSRISSFFVLLLLLAWSRVLLANERRGRCLSTPRPTMSIGVVLDLGLLMGKQQKIAMEIAVQEFNRLSCSKLDLKVRSSRGNSAQTVASAMDLAQSKEILAIIGTITHSEACLASEINSNTKSVPILSLTSPAARTEFSSPPLPNFIQVSDDFSLHMQCIAAIVGEFRWRKVTAIYELNNGFSSDPGVLISLSHSLRLVGSEIDNHLALPSLSSLSDPKSRIENELNNLKRKSNRVFLIVHSSLELASMLCEKAQQMGMMEKGSVWVIPDGVAGLLDSVNSSVISNMQGVIGFKTHFMEMSDANRKFKLKFRRRFASEYPEEENINPSVFAFRSYDATWAIAQAARKSKGKFSLKELSGEIMFSKFDALTGKNGFTNKKLPQSPTFTIINVIGKSYREMAFWSPALGFSKNIVRRELVEINKNNDSSGVLSTVYWPGGSQSVPKGWTHSNEERPLKIAVPANGAFKQFVNVTYDESLNETYINGFSIHVFKDAVKRLPYHLPYEFVLFNGSYDEMVEQVSNQTVDAAVGDISILSYRYHLVEFSQPYVDSGLDMVVTEKPDKSKQTWMFMDTFTKEMWFMMVAIHIFVGLVFWLIEREVNEELQGFGAMIWFLVTVIFFAHREPIRSPLARSVLAPWLFVILIVTSSFTASLTSMMTISQLEPSVLDIQTLQKRNASVFPKSSPLAGDISEALLGIIESGETEQLEKYMLSTASCSPKAKDESPLGYQPFLGLFCICAAVAALALLYIMICLVVKNVGNLVRLLKAALTQLKRIGRWTTANFAGIYSKVQSRSMRRVSAATERRNVEETVTNSEHLPCGC* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1725 838 Gene3D - 52 173 - -
Dod01g1725 838 SUPERFAMILY Periplasmic binding protein-like II 448 725 - -
Dod01g1725 838 Gene3D - 495 567 - -
Dod01g1725 838 PANTHER GLUTAMATE RECEPTOR 696 802 - -
Dod01g1725 838 PANTHER GLUTAMATE RECEPTOR 54 696 - -
Dod01g1725 838 Pfam Bacterial extracellular solute-binding proteins, family 3 500 582 IPR001638 -
Dod01g1725 838 SUPERFAMILY Periplasmic binding protein-like I 52 464 IPR028082 -
Dod01g1725 838 SMART GluR_14 474 730 IPR001320 GO:0015276|GO:0016020
Dod01g1725 838 Gene3D - 585 700 - -
Dod01g1725 838 Gene3D - 174 346 - -
Dod01g1725 838 CDD PBP1_GABAb_receptor_plant 56 430 IPR044440 -
Dod01g1725 838 Gene3D - 350 476 - -
Dod01g1725 838 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 54 696 - -
Dod01g1725 838 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 696 802 - -
Dod01g1725 838 Pfam Ligand-gated ion channel 593 757 IPR001320 GO:0015276|GO:0016020
Dod01g1725 838 Pfam Receptor family ligand binding region 72 368 IPR001828 -
Dod01g1725 838 Gene3D - 568 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1725 Dod-Chr1 50642018 50646628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1725 11 696 Ion Channels AT2G29120 30.727 8.03e-96 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1725 - - gmx:100778941 929.858