Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1723 ATGGAAATTGCCGTCCAAGAGTTCAATCGGTTGAGTTGCTCTAAGCTGGATTTGAAGGTCAGAAGCTCCCGGGGGAATTCGGCTCAGACGGTTGCTAGCGCTACGGATCTTGCACAAAGCGAGGAAATTCTAGCCATCATAGGAACGGTAACACACAGCGAAGCATCTTTGGCAGGTGAAATCAGTAGCAACACGAAGAACATTCCTGTTTTATCTCTAACTTCACCTGCAGCAAGCATAGGGTTATCATCTCCTCCATTGCCAAACTTCATCCACGTGGGCGATGATATCAGCCTTCACATGCAATGCATTGCAGCCATTGTAGGAGAATTCAGATGGCGAAAAGTGACAGCAATCTATGAACTTAACAACGGGTTTTCTTCTGATCCAGGGGTGCTTATTAGTCTCTCCCATTCTCTTCGGCTTGTTGGTTCAGAGATTGATAACCATTTAGCTTTGCCTTCCATATCCTCTCTACCAGACCCAAAATCTAGAATTGAAAACGAGCTTAATAAGCTCAAGAGGAAGAGTAACAGGGTCTTCTTGATTGTGCACTCTTCCTTAGAGCTGGCCAGCATGCTCTGTGAGAAAGCACAACAAATGGGTATGATGGAAAAAGGTTCTGTATGGCTTATCCCAGATGGGGTTGCTGGCCTTCTTGATTCAGTTAACTCATCCGTTATCTCTAACATGCAAGGTGTTATTGGATTTAAAACACACTTCATGGAAATGAGCGATGCAAATAGAAAGTTCAACCTCAAATTCCGAAGAAGGTTTGCATCAGAGTACCCTGAAGAAGAGAACATTAACCCAAGTGTCTTCGCATTTCGATCTTATGACGCAACTTGGGCTATTGCTCAGGCTGCAAAGAAATCAAAAGGAAAGTTCAGCATGAAAGAATTATCAGGAGAGATTATGTTCAGTAAATTTGATGCATTAACTGCAAAGAACGGCTTCACCAATAAAAAGTTACCGCAATCGCCAACCTTCACTATAATTAATGTGATTGGGAAAAGCTACAGAGAAACGGCATTTTGGTCTCCAGCTCTTGGTTTCTCCAAGAACATTGTTAGACATGAGCTAATGGAGATAAACAAAAATAATGATTCTAGTGGAGTTTTGAGCACAGTTTATTGGCCTGGAGGCTCACAGTCGGTTCCTAAGGGATGGACTCACAGTAACGAGGAAAGGCCACTGAAAATTGCAGTGCCTGCAAATGGTGCCTTCAAGCAGTTTGTGAATGTTACCTATGATGAGAGCTTGAATGAAACTTACATAAACTGTTTGTTGTTTAAGAAATGTATTATAGATTGCTAA 1317 0.4222 MEIAVQEFNRLSCSKLDLKVRSSRGNSAQTVASATDLAQSEEILAIIGTVTHSEASLAGEISSNTKNIPVLSLTSPAASIGLSSPPLPNFIHVGDDISLHMQCIAAIVGEFRWRKVTAIYELNNGFSSDPGVLISLSHSLRLVGSEIDNHLALPSISSLPDPKSRIENELNKLKRKSNRVFLIVHSSLELASMLCEKAQQMGMMEKGSVWLIPDGVAGLLDSVNSSVISNMQGVIGFKTHFMEMSDANRKFNLKFRRRFASEYPEEENINPSVFAFRSYDATWAIAQAAKKSKGKFSMKELSGEIMFSKFDALTAKNGFTNKKLPQSPTFTIINVIGKSYRETAFWSPALGFSKNIVRHELMEINKNNDSSGVLSTVYWPGGSQSVPKGWTHSNEERPLKIAVPANGAFKQFVNVTYDESLNETYINCLLFKKCIIDC* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1723 438 CDD PBP1_GABAb_receptor_plant 1 356 IPR044440 -
Dod01g1723 438 Gene3D - 273 402 - -
Dod01g1723 438 Gene3D - 100 272 - -
Dod01g1723 438 Pfam Receptor family ligand binding region 1 294 IPR001828 -
Dod01g1723 438 PANTHER GLUTAMATE RECEPTOR 1 424 - -
Dod01g1723 438 SUPERFAMILY Periplasmic binding protein-like I 1 390 IPR028082 -
Dod01g1723 438 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 424 - -
Dod01g1723 438 Gene3D - 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1723 Dod-Chr1 50624260 50634859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1723 14 424 Ion Channels AT2G29110 30.385 3.58e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1723 - - gmx:100778941 568.155