Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1722 ATGGATCTTGCACAGAGCAAGGAAATTCTAGCCATCATAGGAACAACAACACACAGCGAAGCATGCTTGGCAAGTGAAATTAATAGCAACACAAAGAGCGTTCCTATTTTGTCTCTAACTTCACCTGCAGCAAGGACAGAGTTTTCATCTCCTCCATTGCCAAACTTCATCCAAGTGAGCGATGATTTCAGCCTTCACATGCAATGCATTGCAGCCATTGTAGGAGAATTCAGATGGCGAAAAGTGACAGCAATCTATGAACTTAACAACGGGTTTTCTTCTGATCCAGGGGTGCTTATTAGTATCTCCCATTCTCTTCGGCTTGTTGGTTCAGAGATTGATAACCATTTAGCCTTGCCTTCCTTGTCCTCTCTATCAGACCAAAAATCTAGAATTGAAAACGAGCTTAATAACCTCAAGAGGAAGAGTAACAGGGTATTCTTGATTGTGCACTCTTCCTTAGAGCTAGCCAGCATGCTCTGTGAGAAAGCACAACAAATGGGTATGATGGAAAAAGGTTCTGTATGGCTTATCCCAGATGGGGTTGCTGGCCTTCTTGATTCAGTTAACTCATCCGTTATCTCTAACATGCAAGGTGTTATTGGATTTAAAACACACTTCATGGAAATGAGCGAGGCATATAGAAAGTTCAAGCTCAAATTCCAAAGAAGGTTTGCATCAGAGTACCCTGAAGAAGAGAACATTAACCCAAGTGTCTTCGCATTTCGATCTTATGACGCAACTTGGGCTATTGCTCAGGCTGCAAGGAAATCAAAAGGAAAGTTCAGCCTGAAAGAATTATCAGGAGAGATTATGTTCAGTAAATTTGATGCATTAACTGCAAAGAACGGCTTCACCAATAAAAAGTTACCGCAATCGCCAACCTTCACTGTAATTAATGTGATTGGGAAAAGCTACAGAGAAATGGCATTTTGGTCTCCAGCTCTTGGTTTCTCCAAGAACATTGTTCGACATGAGCTAGTGGAGATAAACAAAAATAATGATTCTAGTGGAGTTTTGAGCACAGTTTATTGGCCTGGAGGCTCACAGTCGGTTCCTAAGGGATGGACTCACAGTAACGAGGAAAGGCCACTGAAAATTGCAGTGCCCGCAAATGGTGCCTTCAAGCAGTTTGTGAATGTTACCTATGATGAGAGCTTGAATGAAACTTACATAAATGGCTTCTCAATTCATGTCTTCAAAGACGCTGTTAAACGTCTTCCTTATCACTTGCCATATGAGTTTGTTCCCTTTAATGGCTCCTATGATGAAATGGTTGAGCAAGTTAGCAACCAGACAGTCGATGCAGCTGTCGGAGATATATCAATTCTGTCATATAGATATCATTTAGTAGAATTCTCACAACCGTATGTCGATTCTGGCCTTGACATGGTGGTTACTGAGAAGCCAGATAAATCAAAACAAACGTGGATGTTTATGGGTACCTTTACGAAAGAGATGTGGTTCATGATGGTAGCTATACACATTTTCGTTGGATTGGTCTTTTGGTTGATTGAAAGGGAAGTCAATGAAGAACTGCAAGGGTTTGGGGCCATGACTTGGTTTTTAGTCACTGTAATATTCTTCGCACACAGAGAACCAATAAGAAGCCCCTTGGCTCGATCAGTGCTGGCACCATGGTTATTTGTTATTCTCATCGTAACAAGTAGTTTCACAGCAAGTTTGACATCCATGATGACTATCTCGCAACTTGAGCCATCAGTGTTAGATATCCAGACCCTTCAAAAAAGAAATGCGTCGGTATTTCCAAAGAGTTCCTCTTTGGCCGGTGATATATCCGAGGCATTATTAGGCGTTATAGAGAGTGGAGAAACAGAACAACTTGAAAAAGATATGCTATCAACTGCAAGTTGCTCTCCAAAAGCAAAAGATGAGTCGCCGTTAGGTTATCAGCCTTTCCTTGGGCTATTTTGCATCTGTGCTGCTGTTGCTACTCTGGCATTATTGTACATCATGATTTGTTTGGTCGTTAAGAATGTAGGGAACTTGGTGAGACACTTAAAAGCTGCACTAACTCAATTAAAGAGAATAGGGAGATGGACAACTGCTAATTTTGCTGGGATATATTCCAAGGTACAATCATGGAGCATGAGAAGAGTTAGTGCTGCCACAGAAAGAAGAAATGTTGAGGAAACTGTAACTAATAGTGAGCACTGCCCTGTGGTTGTTGAACTAGTTTGA 2202 0.4133 MDLAQSKEILAIIGTTTHSEACLASEINSNTKSVPILSLTSPAARTEFSSPPLPNFIQVSDDFSLHMQCIAAIVGEFRWRKVTAIYELNNGFSSDPGVLISISHSLRLVGSEIDNHLALPSLSSLSDQKSRIENELNNLKRKSNRVFLIVHSSLELASMLCEKAQQMGMMEKGSVWLIPDGVAGLLDSVNSSVISNMQGVIGFKTHFMEMSEAYRKFKLKFQRRFASEYPEEENINPSVFAFRSYDATWAIAQAARKSKGKFSLKELSGEIMFSKFDALTAKNGFTNKKLPQSPTFTVINVIGKSYREMAFWSPALGFSKNIVRHELVEINKNNDSSGVLSTVYWPGGSQSVPKGWTHSNEERPLKIAVPANGAFKQFVNVTYDESLNETYINGFSIHVFKDAVKRLPYHLPYEFVPFNGSYDEMVEQVSNQTVDAAVGDISILSYRYHLVEFSQPYVDSGLDMVVTEKPDKSKQTWMFMGTFTKEMWFMMVAIHIFVGLVFWLIEREVNEELQGFGAMTWFLVTVIFFAHREPIRSPLARSVLAPWLFVILIVTSSFTASLTSMMTISQLEPSVLDIQTLQKRNASVFPKSSSLAGDISEALLGVIESGETEQLEKDMLSTASCSPKAKDESPLGYQPFLGLFCICAAVATLALLYIMICLVVKNVGNLVRHLKAALTQLKRIGRWTTANFAGIYSKVQSWSMRRVSAATERRNVEETVTNSEHCPVVVELV* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1722 733 Gene3D - 476 596 - -
Dod01g1722 733 PANTHER GLUTAMATE RECEPTOR 588 689 - -
Dod01g1722 733 Gene3D - 368 475 - -
Dod01g1722 733 PANTHER GLUTAMATE RECEPTOR 1 588 - -
Dod01g1722 733 SUPERFAMILY Periplasmic binding protein-like I 1 356 IPR028082 -
Dod01g1722 733 SUPERFAMILY Periplasmic binding protein-like II 340 617 - -
Dod01g1722 733 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 588 - -
Dod01g1722 733 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 588 689 - -
Dod01g1722 733 Pfam Ligand-gated ion channel 485 649 IPR001320 GO:0015276|GO:0016020
Dod01g1722 733 Gene3D - 242 367 - -
Dod01g1722 733 Gene3D - 64 238 - -
Dod01g1722 733 SMART GluR_14 366 622 IPR001320 GO:0015276|GO:0016020
Dod01g1722 733 Pfam Receptor family ligand binding region 6 261 IPR001828 -
Dod01g1722 733 Pfam Bacterial extracellular solute-binding proteins, family 3 392 473 IPR001638 -
Dod01g1722 733 Coils Coil 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1722 Dod-Chr1 50619359 50623086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1722 3 595 Ion Channels AT5G11210 33.071 1.89e-96 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1722 - - gmx:100778941 834.713