Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1712 ATGAGATCTGGCAATGAGGTTCACTCGGTGGGAGAGTTCAATTTGGATGCCAAGTGGCTCATAGATCCCAAGCAGCTTTTTGTTGGGCCTAAAATTGGGGAAGGAGCCCATGCTAAAGTGTACGAAGGAAAATATAAAAATCAGAATGTTGCTGTTAAGATTATTAATAAGGGAGAAACCCTAGAAGAGATTTCTAGGAGAGAGGCCCGGTTTGCCAGAGAGATTGCCATGTTATCGCGAGTTCAGCACAAAAATCTGGTTAAGTTTATTGGGGCCAGCAAAGAACCTGTTATGGTTATAGTAACTGAACTTCTGTTAGGTGGAACGTTGCGCAAATACCTTTGGAGTATACGGCCAAAGTGCTTGGATATGCATGTGGCAGTTGGATTCGCACTAGATATCGCACGAGCATTGGAATGCTTGCACTCCCATGGGATCATTCACCGTGACCTTAAACCTGAGAACTTGATTTTGACAGAAGATCATAAAACAGTTAAACTAGCTGATTTCGGCCTAGCCAGGGAAGAGTCCTTAACAGAGATGATGACTGCTGAAACAGGGACATATCGCTGGATGGCTCCAGAACTTTACAGCACTGTAACTCTAAGACATGGGGAGAAGAAGCATTACAACAATAAGGTGGATGCCTATAGCTTTGCAATCGTGTTGTGGGAGCTCATCCATAATAAGTTGCCCTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCTTTTAAGAATACAAGGCCCAGTGCTGAAGACCTCCCAGAGGATTTAGCTCTGATTGTGACTTCATGTTGGAAAGAGGATCCAAATGATCGACCCAATTTCAGTCAAATCATACAGATGCTCCTTCGATATCTCACTACTATTACACCGCCTGAGCCAGTTGTTCCTCTGCGAAGGGATTCATCCAAGAATGCTGTATTGCCACCAGAATCTCCAGGTACAAGTGCTTTAATGGCTAGAAGAGATGACTCCGGAGAAACCTCACAAGTCAATATGGAAGACAGGTCTGGAGGGTTTTTCTCCTGCTTTAACCAGTGTTACTGA 1059 0.4419 MRSGNEVHSVGEFNLDAKWLIDPKQLFVGPKIGEGAHAKVYEGKYKNQNVAVKIINKGETLEEISRREARFAREIAMLSRVQHKNLVKFIGASKEPVMVIVTELLLGGTLRKYLWSIRPKCLDMHVAVGFALDIARALECLHSHGIIHRDLKPENLILTEDHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNNKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPSAEDLPEDLALIVTSCWKEDPNDRPNFSQIIQMLLRYLTTITPPEPVVPLRRDSSKNAVLPPESPGTSALMARRDDSGETSQVNMEDRSGGFFSCFNQCY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1712 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Dod01g1712 352 PANTHER PROTEIN KINASE ATN1 1 329 - -
Dod01g1712 352 PANTHER SERINE-THREONINE PROTEIN KINASE 1 329 - -
Dod01g1712 352 MobiDBLite consensus disorder prediction 301 336 - -
Dod01g1712 352 SUPERFAMILY Protein kinase-like (PK-like) 18 307 IPR011009 -
Dod01g1712 352 CDD STKc_MAP3K-like 32 286 - -
Dod01g1712 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Dod01g1712 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1712 352 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Dod01g1712 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Dod01g1712 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Dod01g1712 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Dod01g1712 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Dod01g1712 352 Gene3D Transferase(Phosphotransferase) domain 1 107 300 - -
Dod01g1712 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1712 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1712 Dod-Chr1 50206598 50210623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1712 1 347 MAP Kinase Kinase Kinase AT3G27560 77.119 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod01g1712 PK_Tyr_Ser-Thr 1.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1712 - - gmx:100808329 635.18