Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1711 ATGTTGTCATCACTGATATGGAGCTGGCTTATTGACATAGGAGGCTTTGCAAAGAAAGTGAAAAACACTACTCTGTCTTCAGCTGATCAAATCAAGGACTGTGGAGCATATCGTGAATGTCCAAATTGTCATTATCATATTGATAATAGAGATGTTTCTACCGAGTGGCCTGGACTTCCTGTTGGTGTAAAGTTCGATCCTTCTGATGTAGAACTCTTAGAACATCTAGCAGGAAAATGTGGCATTGGAAACAAAGAGCCGCACAAGTTTATTAACGAATTCATCCCAACACTAGAAGGAGACCAAGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCCAAAAAAGATGGGAGCACTGTCCATTTCTTTCACAAAACAATCAACGCATATACTACTGGTCAACGGAAGCGTCGCAAGATTCATCATCAACAAGGTTTGACGGAAGAGCATGTGCGATGGCACAAGACTGGTAATAACAAAGCTATAATAGATGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGATCTAAGAAAGGGTCCAAGGCCGAAAAATCCAGTTGGGTTATGCATCAATACCATCTAGGGACCGATGAAGATGAGAAGGATGGTGAATATGTGGTTTCAAAAATCTTTTATCAACAGCAAAAGACTGAGAAAAAAGAGAAGAAGCCAGTGGCTGACGATTCTGATAATGTGGCATTGCGAACCAGTCCAAGGACTCCGAAACCAAATCCCCCCAATCCACCTCGGGCAGGAGAGTGTCTTGACTGTGATGATAATATTGATGAAACTGTACTGTCACTCGCCCAGGATGCCAAACCTATCCCTGGAGAATCACATTCCACAAAGCCTGATCTTCAGGATCAGGACAATGCTGGTGACCCTGCATGGTTGGCCGGAGAATCTCAGGCTGTGGAAAATTTTGATTTCGATGGCTTGGATGACATCTTATTGTGCAAGGAAATATTGGATTCTTCTGCTCTATTAAATAATTCTAGACTGGACTCCACCACTGTCAATGGCGTTGCTTCCACTGCAGACGAAATGGCCGGAAATGATAATTTATCATATGGAATTTCTGTTCTGGATATGCTGGAATTGGGTACTCCTCCAGATTTTGATCTCTCAACCTCTTCAGATGCAGTAGTTTTTCTACTCTTGGATGCTTCAGATATAGGATATGAAGCTTAG 1212 0.4191 MLSSLIWSWLIDIGGFAKKVKNTTLSSADQIKDCGAYRECPNCHYHIDNRDVSTEWPGLPVGVKFDPSDVELLEHLAGKCGIGNKEPHKFINEFIPTLEGDQGICYTHPENLPGAKKDGSTVHFFHKTINAYTTGQRKRRKIHHQQGLTEEHVRWHKTGNNKAIIDDGVHKGFKKIMVLYIRSKKGSKAEKSSWVMHQYHLGTDEDEKDGEYVVSKIFYQQQKTEKKEKKPVADDSDNVALRTSPRTPKPNPPNPPRAGECLDCDDNIDETVLSLAQDAKPIPGESHSTKPDLQDQDNAGDPAWLAGESQAVENFDFDGLDDILLCKEILDSSALLNNSRLDSTTVNGVASTADEMAGNDNLSYGISVLDMLELGTPPDFDLSTSSDAVVFLLLDASDIGYEA* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1711 403 ProSiteProfiles NAC domain profile. 59 220 IPR003441 GO:0003677|GO:0006355
Dod01g1711 403 Gene3D NAC domain 68 226 IPR036093 GO:0003677|GO:0006355
Dod01g1711 403 MobiDBLite consensus disorder prediction 277 303 - -
Dod01g1711 403 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 8 385 IPR044799 GO:0003700
Dod01g1711 403 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 8 385 - -
Dod01g1711 403 MobiDBLite consensus disorder prediction 223 263 - -
Dod01g1711 403 SUPERFAMILY NAC domain 44 220 IPR036093 GO:0003677|GO:0006355
Dod01g1711 403 Pfam No apical meristem (NAM) protein 60 201 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1711 Dod-Chr1 50160547 50163440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1711 36 222 NAC Transcription Factor Family AT4G28500 52.910 7.77e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g1711 NAM 2.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1711 - - gmx:100780442 580.867