Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1707 ATGGAGTCACCTGTTGATGGAGTTGAGTCCTTAGCAGATATTCAGAATTCAGTTTCTGGGGTAGATCACGATCCTCCTTCGACATCTGGGACTCCCCGCCCTTCTCGGCCTCCCTTAAGAGCATCTAGAAATCATGGGGCTTCTTCCACATCCTCTTTGACTGGTCACAATACTTATGGAAAGACCATCCACCATCAAGACGGCGATGTAATTGATCAAAAGCACTCTTATCGGGAGGATAGCAATGCTGAGCATGAAGGATTGCCAAACATGGCAAAGCACTGTTATATCCCTAAAGGCAAATCTGACTGTGCTGGCCTTAATAACTCTGTTGAAAGTTGTTTAGGGAAGAATATCTCCATAATGGAAACAAAATTGTGCGTCAAACCAACATTTGAAGATCCCAAGAATTGTGATTCAAGCAGCATAGTGGAATCTGGCAAATCCGTGTTAGGTGCATCAAATGGAGTTGTTGATCAAACAAAGAGTTGTGGTCAGTCAGAGATTACTCTTTGTCAAAGCCCGGAGAATAGTTTCTATTCTGCCACAATCTACTCAGAAGCCAAACAAAGTTTCACAAATACTGGAGTCAGTGAATGTGTAAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTGCTAATTCCTCTGAATTTAATGAGAGCAGGAAGACCAGCATCTATAGAGGGAGTACCGGAAGTGATGTTAGCGATGAGAGCAGCACCAGCAGTTTGAACAGTGCTTTGTATAAACCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATCCGAGCTCATGATGGGGCGTTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAGTTAAGTGGCACAAGGACTTGTTTTGCTATGAAAGTAATGAACAAAACTGAGCTGGCAAGTCGCAAGAAGCTCCTGAGGGCTCAGACTGAGAGAGAGATATTGCAGTCTCTGGATCATCCGTTTCTTCCCACATTGTATACGCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTCTGCCCAGGTGGGGACCTGCATGCGCTCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCATGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATAATCTACAGAGACCTCAAACCCGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTGTCAGACTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTGGTAAAGTCATCAAACTCTAGCTTGGAGATAAAGAGCTCAGGATACTGCGTTCAGCCTGCCTGCATTGAGCCAACTTGCGTAATGAAGCCAGACTGCATCCAACCTTCATGTTTTACGCCACGTTTTCTATCCAGCAAATCCAAGAAAGAAAAGAAGTCCAAACCAAAGAACGATGTGCATAATCAGGTGACCCCTCTCCCGGAGCTTATTGCCGAGCCCACAGATGCCCGATCAATGTCCTTTGTGGGCACGCATGAGTACTTGGCACCTGAAATCATCAAAGGTGAAGGGCATGGTAGTGCTGTAGACTGGTGGACATTTGGTATATTCCTATATGAGCTTTTGTTTGGAAGAACACCATTCAAAGGTTCGGCCAACCGAGCAACTTTGTTTAATGTGGTTGGCCAAAACTTAAGATTTCCAGAATCTCCGACTGTCAGCTTCGCCGCCAGGGACTTGATCAGGGGTTTACTTGTGAAAGAGCCTCAGCATCGTCTAGCCTATAGGCGTGGAGCAACAGAAATAAAACAACATCCCTTCTTTCATAATGTTAACTGGGCATTGATCCGTTGCGCGAGTCCTCCGGAGGTGCCAAGGCAAGCCATGAAAGCACTCACATCTGAAAAGGCGCCTGGTGTGAAGCCTTCTGGTAATTATTTAGATATCGATTTCTTTTGA 1977 0.4497 MESPVDGVESLADIQNSVSGVDHDPPSTSGTPRPSRPPLRASRNHGASSTSSLTGHNTYGKTIHHQDGDVIDQKHSYREDSNAEHEGLPNMAKHCYIPKGKSDCAGLNNSVESCLGKNISIMETKLCVKPTFEDPKNCDSSSIVESGKSVLGASNGVVDQTKSCGQSEITLCQSPENSFYSATIYSEAKQSFTNTGVSECVSVDKSVESGEVANSSEFNESRKTSIYRGSTGSDVSDESSTSSLNSALYKPHKANDIRWEAIQAIRAHDGALEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSSLEIKSSGYCVQPACIEPTCVMKPDCIQPSCFTPRFLSSKSKKEKKSKPKNDVHNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQNLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKALTSEKAPGVKPSGNYLDIDFF* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1707 658 ProSiteProfiles Protein kinase domain profile. 277 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1707 658 MobiDBLite consensus disorder prediction 10 29 - -
Dod01g1707 658 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 4 658 - -
Dod01g1707 658 MobiDBLite consensus disorder prediction 42 61 - -
Dod01g1707 658 Gene3D Transferase(Phosphotransferase) domain 1 361 428 - -
Dod01g1707 658 Gene3D Transferase(Phosphotransferase) domain 1 508 632 - -
Dod01g1707 658 SUPERFAMILY Protein kinase-like (PK-like) 255 635 IPR011009 -
Dod01g1707 658 MobiDBLite consensus disorder prediction 1 63 - -
Dod01g1707 658 MobiDBLite consensus disorder prediction 226 245 - -
Dod01g1707 658 CDD STKc_phototropin_like 275 634 - -
Dod01g1707 658 SMART serkin_6 277 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1707 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Dod01g1707 658 Pfam Protein kinase domain 511 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1707 658 Pfam Protein kinase domain 278 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1707 658 PANTHER FLIPPASE KINASE 1-RELATED 4 658 - -
Dod01g1707 658 Gene3D Phosphorylase Kinase; domain 1 275 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1707 Dod-Chr1 50045641 50049862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1707 202 658 AGC Kinase Gene Family AT5G47750 73.840 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod01g1707 Pkinase 1.2e-37 CL0016