Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1705 ATGTCCCTTAACCCAACATTCCTTCATTTCACACATTCCAATCTTCCCGTCTCCCACACTCCCAAACCGAACACTTTCACCTGCTGCAACTACAACAGTCCCCAAACCCACTTCCTCTTCTCCATCGCTCAATGGGGGCGCTTCAATAGCTTCCGCCTCAGGAACCCAAAGACCCGTTCCCGGCTCGCCTCGTCAGAGAACGACGGGTTCGGCACCGCTGATTCTAGGTTCAAGAATGTTATCGGAAAACCGGTCGGATTCGTAGCATCCATCTTGCCCGGCGGCAGCTGGTGGAGCTTGTCGGACCGCCCGGTAACCGATGCAGAAGAGGCGGAGCCGACGGCGGCAGTGCTCGCACTCCGACGGATGTGGGAGTTGGTTGCCGACAAGGGATGGGTTGTACTCGTGGCGTTTGGGTCCCTTGTCGTCGCTGCTCTTTCAGAGATCACTATGCCGAGTATACTGGCAGCATCAATATTTTCAGCTCAGAGTGGTGAAACTGCGGTCTTCTCTAGGAATGCATTGTTGTTGGTACTCTTGTGTGTCTCTTCTGGGATATGCAGTGGTATGCGAAGTGGTTGCTTTGGAATTTTGAATGTAACATTGGTTAAGCGTCTACGCGAAAATTTATATGCAGCCGTTCTTTTTCAGGACATATCCTATTTTGATAAAGTAAAAGTCGGTGATTTGACAAGCAGGCTTGCAGCAGATTGTCAACGACTATCCCATGTTATAGGAAATGATCTTCATTTGATATTACGCAATACTTTGCAGGGAACAGGAGCAATAATTAATTTGCTGACTCTATCTTGGCCCCTCGCATTATCTGCCCTGGTGATTTGCTCTATGTTATCAGCAATCTTCCTTGTTTATGGCCAGTATCAAAGAAAAGCGGCGAAGTTAACCCAAGATTTCACAGCTTGTGCCAATGAAGTTGCTCATGAAACACTTTCTCTGATAAGAATTGTTCGAGCTTATGGGTCAGAAAAAGATGAATGTAGAAGGTACAAGCAATGGTTGCAGAGGTTAGCATTTATAAACAGTCGAGAAAGTGTGGCTTATGGGTTCTGGAATATGAGCTTTCACACCTTTTATCGTTCAACTCAGATATTTGCAGTGCTATTAGGAGGGATGTCAGTCCTCAGTTGTTGTGTAACTATGGAGCAACTAACTAAGTATGTATTATACTGTGAATGGTTGATTTATGCCACTTGGAGGGTGACAAACAGCTTGTCATCATTACTACAGTCCATGGGAGCATCTGAAAAAGTTTTTGAACTTATGAATCTTTTGCCCAGCGACCAATTCATACCCAAAGGAGTGAAGTTGCAGAGATTAGTGGGGCACATTCGGCTTGTAGATGTATCATTTCATTATCCCACTAGGACCATGATGCCTGTTCTAGAACATTTAAACTTCTCTGTAGATGCGAATCAAGTTGTTGCCATTGTTGGTCTGAGTGGCAGTGGAAAGAGCACATTACTCAACCTTCTACTTCGTCTGTATGAACCTAGTACTGGTCAGATATATATTGATGGCTTCCCTCTTAAGGAGTTAGATATCAGGTGGCTGCGACAAAACATAGGATATGTTGCACAGGAATCCCATCTCTTTCACATGGACATAAAGTCAAACATAAAATATGGTTGCCCTAGGCCCATAAAGCACGAAGATATTGAACGGGCAGCGAGACAGGCCTTTGCCCATGACTTCATTTGTTCACTACCTAATGGCTATGAAACCCTTGTTGATGACAATACACTTAGTGGGGGACAAAAGCAACGAATTGCCATCGCCAGGGCCATTCTTAGGGACCCAGTTATTATGATACTTGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCATTGTATCAAGGAGGTACTGTATGCGTTAAAAGGTGAATCTAGCCCAAGAACCATCATTATCATAGCACATAGGCTATCTACAATAAAAGCTGCTGACAGGATCTTTGTCATGGATAATGGTCGCATCATTGAGATGGGAAACCATGAAGAGCTTCTGCTCAATGATGGGCTCTATGCAAAATTAAATAGAATTCAGGCAGATATTTTCACTTGA 2085 0.4451 MSLNPTFLHFTHSNLPVSHTPKPNTFTCCNYNSPQTHFLFSIAQWGRFNSFRLRNPKTRSRLASSENDGFGTADSRFKNVIGKPVGFVASILPGGSWWSLSDRPVTDAEEAEPTAAVLALRRMWELVADKGWVVLVAFGSLVVAALSEITMPSILAASIFSAQSGETAVFSRNALLLVLLCVSSGICSGMRSGCFGILNVTLVKRLRENLYAAVLFQDISYFDKVKVGDLTSRLAADCQRLSHVIGNDLHLILRNTLQGTGAIINLLTLSWPLALSALVICSMLSAIFLVYGQYQRKAAKLTQDFTACANEVAHETLSLIRIVRAYGSEKDECRRYKQWLQRLAFINSRESVAYGFWNMSFHTFYRSTQIFAVLLGGMSVLSCCVTMEQLTKYVLYCEWLIYATWRVTNSLSSLLQSMGASEKVFELMNLLPSDQFIPKGVKLQRLVGHIRLVDVSFHYPTRTMMPVLEHLNFSVDANQVVAIVGLSGSGKSTLLNLLLRLYEPSTGQIYIDGFPLKELDIRWLRQNIGYVAQESHLFHMDIKSNIKYGCPRPIKHEDIERAARQAFAHDFICSLPNGYETLVDDNTLSGGQKQRIAIARAILRDPVIMILDEATSALDSESEHCIKEVLYALKGESSPRTIIIIAHRLSTIKAADRIFVMDNGRIIEMGNHEELLLNDGLYAKLNRIQADIFT* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1705 694 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 135 416 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g1705 694 Gene3D - 448 689 IPR027417 -
Dod01g1705 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 450 688 IPR003439 GO:0005524
Dod01g1705 694 Pfam ABC transporter transmembrane region 135 396 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g1705 694 PANTHER ATP-BINDING ABC TRANSPORTER 72 692 - -
Dod01g1705 694 ProSitePatterns ABC transporters family signature. 588 602 IPR017871 GO:0005524
Dod01g1705 694 SMART AAA_5 477 665 IPR003593 -
Dod01g1705 694 Pfam ABC transporter 468 616 IPR003439 GO:0005524
Dod01g1705 694 SUPERFAMILY ABC transporter transmembrane region 121 434 IPR036640 GO:0005524|GO:0016021
Dod01g1705 694 PANTHER ABC TRANSPORTER B FAMILY 72 692 - -
Dod01g1705 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 689 IPR027417 -
Dod01g1705 694 CDD ABC_6TM_TAP 137 424 - -
Dod01g1705 694 Gene3D ABC transporter type 1, transmembrane domain 176 447 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1705 Dod-Chr1 49936641 49964353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1705 205 689 Calmodulin-binding Proteins AT2G36910 36.072 6.28e-74 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1705 - - aprc:113857420 1039.64