Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1689 ATGGCGTTCGATCCAAACTTCTCAGAGAATTTTCCTTTCCTTTCTGGGATTTTCCCAGAAAATCCCTTCATAAAGACAGAGAGCCCCACCATGGTTCCGTTGCAGCAAAGCTTTACTATTATACCACCTCCACCGAATAACAACACCTTCTTGTTTCAGAACAATTTCCACCATTTTCAAGCTCTCCCCCTTGGTGAGGCTAACCATCACCCTAGTTTTCAAATGGAGGGTCCTTCCTCCATGAACCCCATCACTATGATCCCAATCCCTTCTTCAGGTAATAATCCATATCAGGCTTCTTATGTCAATGGGTCTCTAAGAGACCTTGCTAATGCCTACTACCCCATGGCATTTGCACCAAATAACAACCAAATGGAGGCCATGCATGGCTACCTGAACAATGGCCAAGGCCTTTGGGATTACTCCCAGAAAATCCCAATTGAGATTGGTGCGAGTTCACGAGCTCAGATGGGTCCCTCTCTGACACCATCACTAATTTATGATGCATCTGGATTGGTGTCCGTGAATCCCAGGTTTCAAGACGAGCTTCCTAGCCTTGCCACAATTGGAAATGGTGACTGGAGCATTGATCAGAAGCCTGTTGCTTTAGGCAGGAGGACCCAGAGGAGGGTGCTGTTGAGGAGGATGGGAAAAAATTCGCGTAAGGATACAAACGTAATCAAAGGCCAATGGAGTGTGGATGAAGACAAGGTGCTCGTTGAGTTGGTGGAACGCTTCGGACTTAAAAAATGGTCCCATATAGCCAAGCTATTGAATGGCAGGATTGGGAAGCAGTGCAGAGAAAGATGGTACAATCATCTCCGACCGAATATTAGAAAGGACTCATGGGACGAAGAGGAGGACAAGATTCTTATTGAAGCTCACAAGCAAGTTGGAAACAAGTGGGCCGAGATTGCGAGGAGGCTGCCTGGTCGTAGTGAGAACACGATCAAGAACCACTGGAACGCCACGAAGCGGCGTGAGAGCGCCAAGAAGAAGAAGAAGAACAAGCGCACCAGCTGTTCCAAGGAAACACTGCTTCAGAGCTACATCAGGCAATTCACTGCAGAAGAAGAAGCTGAAAGGGAGCCGAAAAAGTCCCTAAAGAAGATGCAAATAAAGACTGAGGGTTGCAACAGTGACCAAGCTCCGGATGGGGCTCCGGCTCCCGCCATTCGGGTTCGGAATGAGAACTCAGAGGGCAACAACTTCGGCTGTGAGGATTGGGGTGGTCAGGTGCAGGGTGAAGCTGGTTGGAATCTGCAGCAGCATGTGCCCGTGGCTGGAACTGGTGCTGAATATGAATTTGGCAATGGGTCTGTTGTGGGTGATGGGGCAATGAAGAACTATGTTCCAATGCAGCTGGATAACATAGTGCCGGAGTAG 1386 0.4856 MAFDPNFSENFPFLSGIFPENPFIKTESPTMVPLQQSFTIIPPPPNNNTFLFQNNFHHFQALPLGEANHHPSFQMEGPSSMNPITMIPIPSSGNNPYQASYVNGSLRDLANAYYPMAFAPNNNQMEAMHGYLNNGQGLWDYSQKIPIEIGASSRAQMGPSLTPSLIYDASGLVSVNPRFQDELPSLATIGNGDWSIDQKPVALGRRTQRRVLLRRMGKNSRKDTNVIKGQWSVDEDKVLVELVERFGLKKWSHIAKLLNGRIGKQCRERWYNHLRPNIRKDSWDEEEDKILIEAHKQVGNKWAEIARRLPGRSENTIKNHWNATKRRESAKKKKKNKRTSCSKETLLQSYIRQFTAEEEAEREPKKSLKKMQIKTEGCNSDQAPDGAPAPAIRVRNENSEGNNFGCEDWGGQVQGEAGWNLQQHVPVAGTGAEYEFGNGSVVGDGAMKNYVPMQLDNIVPE* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1689 461 CDD SANT 282 325 IPR001005 -
Dod01g1689 461 PANTHER MYB DOMAIN PROTEIN 100-RELATED 206 368 - -
Dod01g1689 461 Pfam Myb-like DNA-binding domain 228 274 IPR001005 -
Dod01g1689 461 Pfam Myb-like DNA-binding domain 280 322 IPR001005 -
Dod01g1689 461 SUPERFAMILY Homeodomain-like 225 321 IPR009057 -
Dod01g1689 461 Gene3D - 227 279 - -
Dod01g1689 461 MobiDBLite consensus disorder prediction 323 342 - -
Dod01g1689 461 CDD SANT 231 274 IPR001005 -
Dod01g1689 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 279 329 IPR017930 -
Dod01g1689 461 PANTHER MYB PROTEIN-RELATED 206 368 - -
Dod01g1689 461 ProSiteProfiles Myb-like domain profile. 223 274 IPR001005 -
Dod01g1689 461 ProSiteProfiles Myb-like domain profile. 275 325 IPR001005 -
Dod01g1689 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 223 278 IPR017930 -
Dod01g1689 461 SMART sant 227 276 IPR001005 -
Dod01g1689 461 SMART sant 279 327 IPR001005 -
Dod01g1689 461 MobiDBLite consensus disorder prediction 325 339 - -
Dod01g1689 461 Gene3D - 281 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1689 Dod-Chr1 49091265 49094614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1689 222 354 MYB Transcription Factor Family AT4G18770 62.406 1.76e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod01g1689 Myb_DNA-binding 2.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1689 K09422 - mtr:MTR_4g088015 308.531