Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1664 ATGTGCAACAAGAATTGTCCTCCTCCCACCCCTACTCCTTCAGCTACTCGAACCGAAAAGACAATCATGAGGAATAAGATCCGTAAACGAACCAAAGATTTTTCCTCTTCTTCAACTTCTTCTACCACCTCTTCACTTAAACCGCTTCGCCGCAGAAACAGAACCAAAACCAGAAAGCCCAAGTACCTCAGTCTCCGCCTCCAACTCTCTCAGAACAACGAGAAGAACCAACCCAAAAAGACGAAAATGACCCACCACCACCACCAAAAACAACAACAACCAAAAACCCAACAACCCCAGCTGAACCTCTTCCCTCTGCACCCGGAAAACACGGTCGACGACAAAGACGTCATGCACGAGGAGAACAACGTGGCGCTGCTCTTCAGCTCCGAGGGAGGCGCCACCCTCAACGGCCTCCTCGAAGACGAATCCACAACCACGGCCACGGCCACCACCGCCGCCGCCGCCGCCGCCACGTCGGAGGAGGGGTCGTTCTCGCCGCCGGATGTGGAGGGGGGCGACGGGGGGAGCTGGCTGGTGAGGAAGGCGATGAGGAGGAGGGAGGGTGAGGAGGGGATGAGCGAGGAGAGGTGGGTGTGTTACTCGGAGGTGGTGGAGAAGAAGGAGCTCGCGGAGGAAGTGACCAGTCGGCGTGGAACGACGTCGTTTGGGTCGTTGTCCTTGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAGGGTCCCCTTTACGTAGCAGGGGAGGCCCCACAGGCTGTCCCTGATTTGCACGATGATGTCCTCCTCTATAATGCTCTTCCTCCCAATATTGCATTGGATGGGTGGGGTAGTGATGCTATTGGGAACACATGGATTGTTCCAGAAAACTTCGGAACTGAAAAGATGAAGATGAAGGAAGAAGTGGGTTGGAAGCTGGGGCAGAGAGAAGCTAGTGTGCAGAGATACAAGGAGAAGAGGCAAAACAGGCTCTTCTCTAAGAGGATCCGTTATGAAGTTCGCAAGCGCAATGCTGAGAAGCGACCTAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1062 0.5405 MCNKNCPPPTPTPSATRTEKTIMRNKIRKRTKDFSSSSTSSTTSSLKPLRRRNRTKTRKPKYLSLRLQLSQNNEKNQPKKTKMTHHHHQKQQQPKTQQPQLNLFPLHPENTVDDKDVMHEENNVALLFSSEGGATLNGLLEDESTTTATATTAAAAAATSEEGSFSPPDVEGGDGGSWLVRKAMRRREGEEGMSEERWVCYSEVVEKKELAEEVTSRRGTTSFGSLSLKLDHEGILNAWSDKGPLYVAGEAPQAVPDLHDDVLLYNALPPNIALDGWGSDAIGNTWIVPENFGTEKMKMKEEVGWKLGQREASVQRYKEKRQNRLFSKRIRYEVRKRNAEKRPRMKGRFVKRE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1664 353 PANTHER CCT MOTIF FAMILY PROTEIN 43 353 - -
Dod01g1664 353 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 43 353 - -
Dod01g1664 353 MobiDBLite consensus disorder prediction 149 177 - -
Dod01g1664 353 MobiDBLite consensus disorder prediction 1 102 - -
Dod01g1664 353 MobiDBLite consensus disorder prediction 34 48 - -
Dod01g1664 353 ProSiteProfiles CCT domain profile. 310 352 IPR010402 GO:0005515
Dod01g1664 353 Pfam CCT motif 310 352 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1664 Dod-Chr1 48215393 48219729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1664 226 352 C2C2-CO-like Transcription Factor Family AT1G25440 41.791 2.78e-21 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod01g1664 CCT 5e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1664 - - adu:107494886 391.349