Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1653 ATGGAGTACGAGAGCTCACCGCAGCAGGCAAGGGAATCGGAGAAGAAGTCGCTTGTGGTCGGCAACGGCTCCTCCGAGGAGGCCCCGCCGCCAATGCCGGAAGACAATGCCGCTTTCACCGGCAGGATGAAGGGTAAAAAGGAGGGCGAGGATGATGATGATGTTGTTTTTTCTGGGAAAAAGAAGAAGGGGGGTGGTGGTGGTGTTGGTAGGAGGAGCGTGTTCACTGCATCCAGTTTTGGTTTGCTTGGTGATGATGAGATGTCAGGTTTCTCCGGTAAGGAGGAGGTGGAGGAGGAGGAGGATGTTTCGTTGGTTGCATTTTCGGGTAAGAAGAAGAAGAAGTCTTCTAGAAAGAGTAGTAGTAGTAGTAGTGTTGCTGTTAATGTGAGTGATGAAACTGGGTTTGGGAGTGAAAGTGTAGATGATGTGGTTGTTGTTGAGCATGAGGAGCTACCTGGTTTGGAAGTCAGTAATACTACTGTTGCTGTTGCTGACAACAATAATGTGAGTAATAGGAGTGAAGAAGAGGTCACTGCAATTTCGAAGAACAAGAGGAAGAAGAAGAAAAAGAGTGTAAGAACTGCCCAGGAGGAGGAGGAAGATCTGGACAAGATTCTTGCAGAGCTTGGCGAAGGCCCTACAATAGCAAAACCTGATGATGCTCCTCCTCCGCCGCCACAGGATGATGATGACGTCAATGCCGCTTTGGGCGAAAAGGAGGGGGAAGATGAGACTGTAGAGTCTGCTGCTGCTGCTGCAAATAAGAAGAAGAAAAAGAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGTTGCTGCTATCGCCGCCGCCGCTGCTGCTGCTGGAAGTGCACTGGAAAATGAAACCAAAGAAGAAGTCAAAGCTGCCGAGCCAATTGAATCGAAGAAGAACGGGCCATTCACTAAAGCAGCAGGCGAGAGGAAGAAAGTGCCAAAGCACGTTAGGGAGATGCAAGAGGCATTAGCTCGAAGAAAGAGGAGGAAGAAAGGAAGAAGAGAGAAGAGGAGGAGAGAAGAGGCGAGGCGCAGGAAGAAGGAGAAAGAAAAGGCGAAGCTTCAGAGGAAGAAGCAGGAAGGCAAGCTCTTAACTTTTAAGCAGAAGGAAGAAGCCCGCCGATTGGAGATAATGAGGAAGCAGTTTCTGAATAATAGCACGTGCGATGTGGTGACTCTCCCCACTGCTCTAGCTAAAAGGCCCATATATCGGGCGAAGAAACCAAAACCAACCCGTCATCATCAAGAGAGTGGTGCTGCTGCGGCTGTTGAGACGGCTGAAAGCGTTGAAGAAACAAACGGAAGTCAGGAGATGACTATCACCAATGCGGCGGATCCAGAACAGGTTGAAGATGAGGAGGTGGAGGAGAAAGTTGAACTTCTTCTTGAAGCTGGTGGTGAAGATGGTAATGGAGTAGAAGAAGAAGATGACTTGGAGGAGGATGAATGGGATGCAAAAAGCTGGGATGATGATGATGATGATGATGTCATTCTCAATGCCAAAGGTGCATTTGCTGATGAAGAAGAGGTTGACTCCGAGCCTGAATCAGTTGTCAAACAGGAGACAAAAACTGCCGTAACTGCTGCTCACAGTGCTGGTACTACAATGAAAACTGTTCCCAAGTCTACTGTGCCTCCTAAGTTCCTGAGTGTAGGAAACCTCCGCTCCCCAATTTGCTGTATAATGGGACATGTGGACGCTGGTAAAACCAAGCTGTTGGATTGCATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGTGGTATCACACAGCAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGTGAAAGAACAAAGGAATTGAAAGCTGATGCAAAGCTAGAAGTTCCTGGTCTGCTGGTTATTGATACCCCAGGGCACAAACCATTTACGAAATTAAGGTCTAGGGGTTCAGGAATATGTGATGTTGTAGTTTTGGTTGTTGACATTACACGTGGCTTAAAGCAAAACACAACAGAAAAAACAACCAAAAAAACAACAGCAAAAACAATAGAAGAGACAACAGAAGAAACAACAACAGAGCTACTCAATCTATTAAAAGACAGGAATACAGAATTCATTATTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGCAATTCCCCAATTGTTAAAGCCATGAAGCAGCAGACTAAGAATGTTCAAATTGAGTTCAATATGAAGGTCACTCAGATTATTACTCAATTCAAGGAACATGGGCTAAATACTGCCTTGTATTATAAAAACAAGGAAATGGGAGAAACATTCAACATTGTTCCCACAAGTGCAATAAGTGGTGAAGGAATTCCAGATTTGTTGTTGCTGTTGGTTCAATGGACTCAAAAAACAATGGTTGGCAAACTTACTTATAGTGAAGAAGTGAAGTGTACTGTCTTGGATGTCAAGGTTCTTGAAGGCCATGGAACTACTCTTGATGTTGTTCTAGTAAACGGTGTTCTTCATGAAGGAGATCAGATAGTTGTCTGTGGAATGCAGGCAAGCATGGGCCAATTGTCACAACAATTCGAAGCTTTATTGACACCACATCCAATGAAGGAACTTCGTGTTAAGGGAACATATCTCCATCATGAAGAAATCAAAGCTGCAATGGGTATAAAGATCTCTGCCCGGGGTCTTGAACATGCTATCGCTGGCACTGATTTGTATGTGGTAAAGGTTGATGATGATTTGGAAGATGTTAAAGAGGTTGCAATGGAAGATATGAGGTCAGTCATGGACAGGATTGATACAAGTGGTGTGGGAGTTTGTGTACAGGCATCTACTCTTGGCTCATTGGAAGCACTACTGGAGCTTTTGAAATCAGAAGTGAAAGTTCCCGTTAGTGCTATAAGCATAGGCCCTGTATATAAAAAGGATGTAATGAAGGCAAGCATAATGCTTGCAAAGAATCGAAAGTATGCTGCTATATTAGCATTTGATGTCAAAGTCACTCCTGAGGCTAGGGAACTTGCAGATGAATTGGGTGTAAAATTTTTTATTGCTGATGTATTTTACCAGCTGTCTGATCAATTTAAGGCCTATATTGAAAGCATTAATGCAGAGGAAAAAAGAGAAGCTGCTGATCAGACAGTCTTCCCATGTGTACTGAAAATTTTGCCGGGTTGCATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATGTCCTTGAAGGCATTGCAAAGGTTGGAACTCCTATCTGTATTCCTTCTAGAGAGTTCATTGACATTGGTCGCATTGCTTCCATTCAATATAACCATAAGCCAGTTGATAGTGCAAAGAAAGGGCAGCAAATAGCCATTAAGATTGTTGGCAGCCACCCTGAGGAGCAACATAAAATGTATGGGAGGCATTTTGATAATGGTGATGAACTTGTAAGCCATATTTCAGAGAGATATACTCCTGATCGGGTAAGTCATGAATAA 3459 0.4412 MEYESSPQQARESEKKSLVVGNGSSEEAPPPMPEDNAAFTGRMKGKKEGEDDDDVVFSGKKKKGGGGGVGRRSVFTASSFGLLGDDEMSGFSGKEEVEEEEDVSLVAFSGKKKKKSSRKSSSSSSVAVNVSDETGFGSESVDDVVVVEHEELPGLEVSNTTVAVADNNNVSNRSEEEVTAISKNKRKKKKKSVRTAQEEEEDLDKILAELGEGPTIAKPDDAPPPPPQDDDDVNAALGEKEGEDETVESAAAAANKKKKKKKKEKEKEKKVAAIAAAAAAAGSALENETKEEVKAAEPIESKKNGPFTKAAGERKKVPKHVREMQEALARRKRRKKGRREKRRREEARRRKKEKEKAKLQRKKQEGKLLTFKQKEEARRLEIMRKQFLNNSTCDVVTLPTALAKRPIYRAKKPKPTRHHQESGAAAAVETAESVEETNGSQEMTITNAADPEQVEDEEVEEKVELLLEAGGEDGNGVEEEDDLEEDEWDAKSWDDDDDDDVILNAKGAFADEEEVDSEPESVVKQETKTAVTAAHSAGTTMKTVPKSTVPPKFLSVGNLRSPICCIMGHVDAGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLEVPGLLVIDTPGHKPFTKLRSRGSGICDVVVLVVDITRGLKQNTTEKTTKKTTAKTIEETTEETTTELLNLLKDRNTEFIIALNKVDRLYGWKTCRNSPIVKAMKQQTKNVQIEFNMKVTQIITQFKEHGLNTALYYKNKEMGETFNIVPTSAISGEGIPDLLLLLVQWTQKTMVGKLTYSEEVKCTVLDVKVLEGHGTTLDVVLVNGVLHEGDQIVVCGMQASMGQLSQQFEALLTPHPMKELRVKGTYLHHEEIKAAMGIKISARGLEHAIAGTDLYVVKVDDDLEDVKEVAMEDMRSVMDRIDTSGVGVCVQASTLGSLEALLELLKSEVKVPVSAISIGPVYKKDVMKASIMLAKNRKYAAILAFDVKVTPEARELADELGVKFFIADVFYQLSDQFKAYIESINAEEKREAADQTVFPCVLKILPGCIFNKKDPIVLGVDVLEGIAKVGTPICIPSREFIDIGRIASIQYNHKPVDSAKKGQQIAIKIVGSHPEEQHKMYGRHFDNGDELVSHISERYTPDRVSHE* 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1653 1152 MobiDBLite consensus disorder prediction 233 254 - -
Dod01g1653 1152 Coils Coil 337 369 - -
Dod01g1653 1152 Gene3D Translation factors 1037 1146 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 473 499 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 160 177 - -
Dod01g1653 1152 CDD aeIF5B_II 804 917 - -
Dod01g1653 1152 Gene3D Translation factors 803 924 - -
Dod01g1653 1152 Gene3D - 925 1029 IPR036925 -
Dod01g1653 1152 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 908 1036 IPR036925 -
Dod01g1653 1152 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 559 796 IPR000795 GO:0003924|GO:0005525
Dod01g1653 1152 Coils Coil 247 271 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 307 330 - -
Dod01g1653 1152 CDD IF2_aeIF5B_IV 1045 1140 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 331 349 - -
Dod01g1653 1152 Gene3D - 554 802 IPR027417 -
Dod01g1653 1152 Pfam Translation-initiation factor 2 910 1023 IPR023115 -
Dod01g1653 1152 SUPERFAMILY Translation proteins 1042 1143 IPR009000 -
Dod01g1653 1152 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 117 535 IPR015760 -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 120 136 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 1 370 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 350 370 - -
Dod01g1653 1152 PANTHER PHOTOSYSTEM II PROTEIN D1 117 535 - -
Dod01g1653 1152 PANTHER PHOTOSYSTEM II PROTEIN D1 555 1143 - -
Dod01g1653 1152 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 555 1143 IPR015760 -
Dod01g1653 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 560 874 IPR027417 -
Dod01g1653 1152 Coils Coil 189 209 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 433 448 - -
Dod01g1653 1152 CDD IF2_eIF5B 562 793 - -
Dod01g1653 1152 Pfam Elongation factor Tu GTP binding domain 563 792 IPR000795 GO:0003924|GO:0005525
Dod01g1653 1152 MobiDBLite consensus disorder prediction 40 60 - -
Dod01g1653 1152 MobiDBLite consensus disorder prediction 407 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1653 Dod-Chr1 47942114 47951762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1653 75 1143 Eukaryotic Initiation Factors Gene Family AT1G76810 52.096 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1653 K03243 - gmx:100814640 1081.24