Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1640 ATGGCTAGGAGCTGGCTTATTGACATAGGAGGCTTTGCAAAGAAAGTGAAAAACACTACTCTGTCTTCAGCTGATCAAATCAAGGACTGTGGAACATATCGTGAATGTCCAAATTGTCATTATCATATTGATAATAGAGATGTTTCTACCGAGTGGCCTGGACTTCCTGTTGGTGTAAAGTTCGATCCTTCTGATGTAGAACTCTTAGAACATCTAGCAGGAAAATGTGGCATTGGAAACAAAGAGCCGCACAAGTTTATTAACGAATTCATCCCAACACTAGAAGGAGACCAAGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCCAAAAAAGATGGGAGCACTGTCCATTTCTTTCACAAAACAATCAACGCATATACTACTGGTCAACGGAAGCGTCGCAAGATTCATCATCAACAAGGTTTGACGGAAGAGCATGTGCGATGGCACAAGACTGGTAATAACAAAGCTATAATAGATGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGATCTAAGAAAGGGTCCAAGGCCGAAAAATCCAGTTGGGTTATGCATCAATACCATCTAGGGACCGATGAAGATGAGAAGGATGGTGAATATGTGGTTTCAAAAATCTTTTATCAACAGCGAAAGACTGAGAAAAAAGAGAAGAAGCCAGTGGCTGACGATTTTGATAATGTGGCATTGCGAACCAGTCCAAGGACTCCGAAACCAAATCCCCCCAATCCACCTCGGGCAGGAGAGTGTCTTGACTGTGATGATAATATTGATGAAACTGTACTGTCACTCGCCCAGGATGCCAAACCTATCCCTGGAGAATCACATTCCACAAAGCCTGATCTTCAGGATCAGGACAATGCTGGTGACCCTGCATGGTTGGCCGGAGAATCTCAGGCTGTGGAAAATTTTGATTTCGATGGCTTGGATGACATCTTATTGTGCAAGGAAATATTGGATTCTTCTGCTCTATTAAATAATTCTAGACTGGACTCCACCACTGTCAATGGCGTTGCTTCCACTGCAGACGAAATGGCCGGAAATGATAATTTATCATATGGAATTTCTGTTCTGGATATGCTGGAATTGGGTACTCCTCCAGATTTTGATCTCTCAAATTTGAATTTTTGTTCTCAAGACAGTATCTTTGACTGGGTGGACAGACTATGA 1191 0.419 MARSWLIDIGGFAKKVKNTTLSSADQIKDCGTYRECPNCHYHIDNRDVSTEWPGLPVGVKFDPSDVELLEHLAGKCGIGNKEPHKFINEFIPTLEGDQGICYTHPENLPGAKKDGSTVHFFHKTINAYTTGQRKRRKIHHQQGLTEEHVRWHKTGNNKAIIDDGVHKGFKKIMVLYIRSKKGSKAEKSSWVMHQYHLGTDEDEKDGEYVVSKIFYQQRKTEKKEKKPVADDFDNVALRTSPRTPKPNPPNPPRAGECLDCDDNIDETVLSLAQDAKPIPGESHSTKPDLQDQDNAGDPAWLAGESQAVENFDFDGLDDILLCKEILDSSALLNNSRLDSTTVNGVASTADEMAGNDNLSYGISVLDMLELGTPPDFDLSNLNFCSQDSIFDWVDRL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1640 396 Gene3D NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
Dod01g1640 396 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Dod01g1640 396 MobiDBLite consensus disorder prediction 273 299 - -
Dod01g1640 396 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Dod01g1640 396 MobiDBLite consensus disorder prediction 219 259 - -
Dod01g1640 396 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Dod01g1640 396 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 394 IPR044799 GO:0003700
Dod01g1640 396 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1640 Dod-Chr1 47668029 47672106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1640 14 227 NAC Transcription Factor Family AT1G28470 47.881 4.26e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g1640 NAM 2.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1640 - - gmx:100780442 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1640 01 47668029 47672106 Dod01g1640 01 47668029 47672106 ECH