Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1631 ATGGATTACAGAATTGAGGGCGCAGAAACTCACAGGAATAAGTGTGCAGCATGCTTTAGACAGTTCAACAAACTGGAGCACCTTGTGGAGCACATGAGGATCTCATACCATTCGGTTCATGAACCGACCTGTGGCATTTGTAGGAAACACTGCAGGTCATTTGAGTCTCTAAGGGAACATCTTATAGGTCCATTGCCAAAACAGGAATGCCGAGATATTTTTGCTTACCGAGGGTGCAAGTTTTGCTTGAAAGTCCTTGATAGCCCTAACTCTCGTAGGATCCACCAAGAAAAATGCCAACTCTCGGGATTAAATGCTGGAATAATTGGTCGCTTTTCAAACTTTGGTCTTCGTGATAATTTGACTACTGGTGGGGGAGGAAGAGGAACACAAGTAGTTGCACTTGCTTGTAAAATGGTTGGAGGTGGCAGTGACGGTTCACTGGATCTTTGTGCAAGAATTTGCATAATCGATGAGCATGAGAACATCATCTTCCATTCTTATGTGAAACCACCAATTCAAGTGACAAACTACAGGCATGAGATGACAGGCATAAGACCAGAATATCTGAGGGATGCAATGCCACTGAAGCAGGTTCAGAGGAGGATTCAAGACTTCCTTTGCAATGGAGAACCTATGTGGACCATTCGAGCAAGAGGTGGAAAAGCCAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTAGAATGTCTGCAAACAGAATATCGAGCAGAAAAGATAAGGGACACTGCAAAGTACCCTCCACTGATGAAAACGAGCAAGCTGAGCAACTCTCTCAAGTATGACATTCAGACTGGGATACAGGATCCTTATGATGATTGTGTTGCAACAATGAGGCTCTACAAGAGAATGAGGTCCCAAGAACATAAAATAGAGGATTACCCTTTGGCATCTGACCCCCAGAATAGGAATAACTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGTTGGAAATCTCGAGGTCTGACTACTACTGCTGGTGCATGGATTCCTTATATAGCTCATGA 1047 0.4374 MDYRIEGAETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFESLREHLIGPLPKQECRDIFAYRGCKFCLKVLDSPNSRRIHQEKCQLSGLNAGIIGRFSNFGLRDNLTTGGGGRGTQVVALACKMVGGGSDGSLDLCARICIIDEHENIIFHSYVKPPIQVTNYRHEMTGIRPEYLRDAMPLKQVQRRIQDFLCNGEPMWTIRARGGKARILVGHGLDHDLECLQTEYRAEKIRDTAKYPPLMKTSKLSNSLKYDIQTGIQDPYDDCVATMRLYKRMRSQEHKIEDYPLASDPQNRNNFASWRQSELERMSPEQMLEISRSDYYCWCMDSLYSS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1631 348 Gene3D - 128 307 IPR036397 GO:0003676
Dod01g1631 348 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 7 344 - -
Dod01g1631 348 SUPERFAMILY Ribonuclease H-like 145 293 IPR012337 -
Dod01g1631 348 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Dod01g1631 348 Pfam Exonuclease 149 253 IPR013520 -
Dod01g1631 348 PANTHER OS02G0709000 PROTEIN 7 344 - -
Dod01g1631 348 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Dod01g1631 348 SMART exoiiiendus 131 297 IPR013520 -
Dod01g1631 348 CDD REX4_like 133 289 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1631 Dod-Chr1 47135436 47137864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1631 1 345 C2H2 Transcription Factor Family AT3G27970 73.034 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1631 - - gmx:100813973 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1631 01 47135436 47137864 Dod01g1631 01 47135436 47137864 ECH