Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1617 ATGTCCTTCAATCAATCAAAATCCGATAAGAGCGACCAAGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCCTCCGGCGGTGCATACGTCAAGAGCGGCGGTGGCGGGGCCGCACCTTCTCCGTCACTATCCTCTAGCAGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACACTACCCCTGTGAATTCAAGTGAGTCTAGCAGTGCTTATGCAACTCGGACCATACCAAATGGTAGCCATGTACAGCCGCAATTTCATGGAGGATCTGATGTACCAGTTACAAACTCAACTGCCAAGCCATCCGAATCATCAACTACTCAGAGGAGCACCAGAGGTGTTCCAAAAGCTCCTCCACCTCAATCTTCCGCCTTGAGTTCAGATCCTGCTGCGCCTACAACGCCGGCTAAGGCCCCAGCAGATGCGTCCAAGGCATTTTCTTTCCAATTTGGATCTATCAGTCCTGGTTTTATGAATGGGATGGCAATTCCTGCTCGTACAAGCTCAGCTCCACCCAATTTGGATGAGCAGAAGCGTGATCTGGCTCGTCATGATGCTTTTAAACCTGTGCCTTCAGGGCCAACACCACCTGTTCCAAAGCAGCAGCCAGTGAAGAAGGATACAGGTGTTGCGGACCAATCTAGTGCTGGGGAGACTCATACTGCAACTAAGGCAAAAAAAGACACTCAGGTGTCAGCGTTGCCTACTGCAAGCCAGATGCAGAAGCCTTCTGTTGTTCATGTACCTGGATTTTCAATGGCAATGCCATATCATCAGCCCCAGGCATCTGTACAGTTTGGTGGTCCCAATCCACAGATTCAATCTCAGGGCATGTCAACGGCATCTCTTCAGATGCCTCTACAGATGCCTTTACCAATTGGAAATGCTGCACAAGTGCAACAACAAGTGTTTGTTCCAGGTCTTCAACCTCATCATATGCATCCTCAAGGAATCATGCATCAGAGCCAAAACATGAGTTTTACTCCTCAAATGGGCCCTCAGTTGCCCCATCAGTTAGGTAGCATGGGTATTGGCATCAACACACAATATTCTCCACAGCAAGGAGGGAAATTTACTGGTCCTCGGAAAACTACTCCTGTCAAGATAACTCATCCTGAGACCCATGAAGAGCTGAGGCTTGATAAATGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCTCATTCTAGTGTACCTTCTCAATCTCAACCTGTCCAGCCATTTCCAGCGTCTCATCCTATTAATTACTATCCTTCCAGTTCCTACAGTGCCAGTTCTCTATTTTATCCACCTCCTAGTTCTCTTCCATTAACAAGTAGTCAGATAACTCCCAATTCTCAGCCACCAAGATTTAATTATGTGGTGAGCCATGGTCCACAAAATGTCAGTTTCATGAATTCATCATCTCAGAGTACCCTACCTGTAAATAAAGTTGGCACTCAAATTCCTGGCATTGTTGAGCCACCTAATCCAGAATTTTCCCGTGATGTGCACATTGCAATCTCATCATCTTCAGCTGGAGCAACATCTGTGTCTACTAAGCCAAGTGGGGGGTCTGGTGTTGTGGATTCACCAGTTGCCAATTCCAATATTTCTGTGGTCCAAAAGGTTGAATATCCTAGATTTTTGGTTGCATCTGGTGATGCCAGCTCCTCTGTGCCACAAAAAGGTTATGAAACTTGTTCTGAAGTCTCTTCACAACAGTCTAAGTTATCCAGTGATTCTTCAGTTTTAAGCTCATTGCCAAAACAATATGCTGCATCTTCTGAGAAGCTTGTAGCTGCTCCATCGATGCTGCCTTCACCTGCTGCGAGTGAGGATTCTGTTTCAGTTGTGTCTAATAATGAAGGCAGAAGGGAGGAATCTCTTATTCGGTCAAATTCTTTGAAGGATAATCAGAAGAAAATACTTAAGAAAGGGCAATTACAAAATCAGGTTGCTGAACAATCTCCTGCTGTGGCTAATGTGCCTGCCAAAGCCATTGAGTGTGATATACATGATACTGGCGTTTCTGGAACTGTAGAAACTAAAGCAAACCATTCTGCAGCAATTACCAGTGATCTCCCAGTAGCAGCTTCAGACACATTATCCACTCCTAGTGCGGACATGCCTTGTGCTGTTGAAGCTAACAGCAGTAATTCTATGAAAGTTTCTGCTCGTCTTTCATCTGAAGAAGGGCCTGTTGCTCAAGCTGTGGATAGTTTGACTGAGAGTGATGATTCACAGCAGGAGGAACTGTTAAAGGAGAATATTTCAGAAATGGGTGATAAAACTGAAATGTCATCTCTTCAAGGATTTAAACAAAAGCAGGATGAATCTCCAAGCTGTACTGCTGAAAGTGAGAGGACTGGTGATGATTTAGGCATGTCTACCTCTGCTGCATTGGGTTCTGGAGATGTCTCCTTAATTACAGATGATATTGCAGTTGGTAGTGAAGATGTTTCTGCAAATTCTGGCACATCATATCACCAGTCTGCTGATATTCCAGAAGCAACTTTGAAAAATTGCAAGGATAGTCTTGAGAATGCTGGCAGTGATGCGATGTCTCTTCCAGCATCAGGTACCAAGGACAGACCTATTTTAGAGCCTAATAAGGTGAAAATTGCAGCTAAGGCGAAAAAGAAAAGAAAAGAGATTCTTCTGAAAGCAGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATACAAGGGTCCTGAGGAAAAGAAAGATGCTGTTGTGAGTTCAGATAAAACAGAAACCATTTCTACTCCTGGAGGTTTGGAGCAGTTTTCTACTGATTTGGCTCAGCCAGATGCTGTAGCAAGTGAGCAATGTGGACATAGTAAAGCTGAACTTGATGATTGGGAGGATGCTGCTGACATATCTACACCAAAACTAGAAGTTTCAGATCAAACTGAACAGGTTAATGATGGAAATGTAGGCACAGTGAAGAAGTACTCTCGAGATTTCCTTTTGAAATTTGCAGAGCAATGCACTGATCTTCCTGAAGGATTTGAAATTACAGCAGACATATCTGAGGTTGTGATGAGTCCTAATATTAATAATTTGCATGTTACTGAACGTGATTTACATCCTTCTCCTGGAAGAATTATAGATAGGCCTAGTGGGATGTCTCGGATGGATCGTCGTGGGAGTGGTGCTATTGAGGAAGATAAATGGAGCAAAGTCCCTACTGGTTTTCAACCTGGTATGCGTTTGGATGGTATTGGAGGTAATACAGGATTCCGGCCAGGTCAAGGGGGCAATTTTGGTGTTTTAAGGAATCCTCGCGCACCTATGCAATATGCCGGAGGGATTCTTTCTGGGCCAATGCAGTCCATGGGAAATCAGGGAGGAATGCCGAGAAACAGCCCTGACAGTGAAAGGTGGCAGCGTGCTACTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACTCCTCAAAGTCCTCTGCAGATGATGCACAAAGCTGAGAAGAAATATGAGGTGGGTAAGGTGGCAGATGTGGAACAGGCAAAGCAGAGGCAGTTGAAAGCTATATTAAACAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAAGTAAAAGCAGTTAATATTGACAATGCAGTAACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTTTGATGGAGCCTACCTTCTGTGAAATGTACGCCAATTTCTGTTCACACCTGGCAGCTGAGCTACCTGATTTTAGTGAAGACAACGAGAAGATAACTTTTAAGAGATTATTATTGAACAAGTGCCAGGAGGAATTTGAGAGGGATGAAAGAGAGCAAGAAGAAGCTGACAAGGCTGATGAAGGTGAGGTCAAGCAGTCTAAGGAAGAAAGGGAAGAGAAGCGAACCAAGGCAAGGAGACGCATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGAATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCTGATGAAGAGGACATTGAAGCTTTGTGCAAGTTGATGAGTACGATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATAGATGTATATTTTGAAAGGATGAGACTGTTATCAAATAACATAAATTTATCTTCAAGGGTGAGGTTCATGTTGAAAGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAAATAGAGGAGGTACATAGAGATGCTTCTCAAGAGCGGCAGGCCCAAGCTGGTAGGTTGGGGCGTGGTCCGGGCAACAATCCAGCTAGAAGGTACCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTACCTTCTCCTAATGCTCAGATGGGTGGACTGCGTGGGGGGCTACCTACTCAAATTCGTGGGTATGTTCCACAGGATGCTCGCATGGATGATAGGCAACCTTTTGAGGCTAGGACCCTGTCAGTTCCATTGCAAAGGCCTTTAGGTGATGATTCAATAACCTTGGGGCCCCAGGGTGGTCTTGCCAGAGGAATGTCCATAAGAGGTTCAACTGCAGTTTCAAGTTTGACTGGTCCTAATGGTTATACTAATCTATCAGAGGCCTTACCATATAGTTCTAGGGAGGACCTCACACCAAGATATGTTCTGGATAGAGTTGCCGCTCCCACTGCCTATGATCAATCAAATGTCCAAGAGCGTAATATCAATTATGGTAACAGGGACTTGAGAAATTCTGACAGGAATCTTGACAGACCTGTTCTATATTCACCTCCTGCTCGAGTTCATGGGACAACAGTCTCCCAGAACACTTCTTCAGAGAGGGTTTTGCCAGAAGAACAATTGCGGGACAAGTCCATGGAAGCAATAAGGGAATATTATAGTGCTAGAGACGAGAAGGAAGTTGTTTTGTGTGTCAAAGATTTGAACTCTCCAAGTTTTCATCCTTCCATGGTTTCTATATGGGTCACGGACTCTTTCGAGCGAAAGGACAAGGAGAGAGATCTTTTGGCCCAATTACTAGTCAACCTCGTGAAATCTCAGGATGGCACCTTGAGTCAAGCCCAGCTAATCAAAGGGTTTGAATATGTTCTCAATACTTTGGAAGATGCGGTTAACGATGCCCCAAAAGCAGCCGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGGATGTAGTCTCTTTGAAAGAGATTGGGCGGTTAATACATGATGGCGGAGAGGAACCAGGCAGGCTCTTAGAAATTGGACTTGCGGCTGATGTTCTCGTAAGCACTCTGGAGGTCATAAAAGTGGAGAAGGGGGATGCTGTTTTAAATGAGATCCGGACCAGCTCCAACTTGCGGTTGGAGACTTTCCGGCCGCCAGAACCTATTAAATCAAGGAAGTTAGAGAAATTTATTTAG 5448 0.4446 MSFNQSKSDKSDQVYRKSGRSASFNQQRGSSGGAYVKSGGGGAAPSPSLSSSRSFNKKSNNNAQGGQSRVNTTPVNSSESSSAYATRTIPNGSHVQPQFHGGSDVPVTNSTAKPSESSTTQRSTRGVPKAPPPQSSALSSDPAAPTTPAKAPADASKAFSFQFGSISPGFMNGMAIPARTSSAPPNLDEQKRDLARHDAFKPVPSGPTPPVPKQQPVKKDTGVADQSSAGETHTATKAKKDTQVSALPTASQMQKPSVVHVPGFSMAMPYHQPQASVQFGGPNPQIQSQGMSTASLQMPLQMPLPIGNAAQVQQQVFVPGLQPHHMHPQGIMHQSQNMSFTPQMGPQLPHQLGSMGIGINTQYSPQQGGKFTGPRKTTPVKITHPETHEELRLDKWADAYSDGGSSGARSHSSVPSQSQPVQPFPASHPINYYPSSSYSASSLFYPPPSSLPLTSSQITPNSQPPRFNYVVSHGPQNVSFMNSSSQSTLPVNKVGTQIPGIVEPPNPEFSRDVHIAISSSSAGATSVSTKPSGGSGVVDSPVANSNISVVQKVEYPRFLVASGDASSSVPQKGYETCSEVSSQQSKLSSDSSVLSSLPKQYAASSEKLVAAPSMLPSPAASEDSVSVVSNNEGRREESLIRSNSLKDNQKKILKKGQLQNQVAEQSPAVANVPAKAIECDIHDTGVSGTVETKANHSAAITSDLPVAASDTLSTPSADMPCAVEANSSNSMKVSARLSSEEGPVAQAVDSLTESDDSQQEELLKENISEMGDKTEMSSLQGFKQKQDESPSCTAESERTGDDLGMSTSAALGSGDVSLITDDIAVGSEDVSANSGTSYHQSADIPEATLKNCKDSLENAGSDAMSLPASGTKDRPILEPNKVKIAAKAKKKRKEILLKADAAGSTSDLYNAYKGPEEKKDAVVSSDKTETISTPGGLEQFSTDLAQPDAVASEQCGHSKAELDDWEDAADISTPKLEVSDQTEQVNDGNVGTVKKYSRDFLLKFAEQCTDLPEGFEITADISEVVMSPNINNLHVTERDLHPSPGRIIDRPSGMSRMDRRGSGAIEEDKWSKVPTGFQPGMRLDGIGGNTGFRPGQGGNFGVLRNPRAPMQYAGGILSGPMQSMGNQGGMPRNSPDSERWQRATSFQQRGLIPSPTPQSPLQMMHKAEKKYEVGKVADVEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLAAELPDFSEDNEKITFKRLLLNKCQEEFERDEREQEEADKADEGEVKQSKEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHIDVYFERMRLLSNNINLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQAGRLGRGPGNNPARRYPMDFGPRGSSMLPSPNAQMGGLRGGLPTQIRGYVPQDARMDDRQPFEARTLSVPLQRPLGDDSITLGPQGGLARGMSIRGSTAVSSLTGPNGYTNLSEALPYSSREDLTPRYVLDRVAAPTAYDQSNVQERNINYGNRDLRNSDRNLDRPVLYSPPARVHGTTVSQNTSSERVLPEEQLRDKSMEAIREYYSARDEKEVVLCVKDLNSPSFHPSMVSIWVTDSFERKDKERDLLAQLLVNLVKSQDGTLSQAQLIKGFEYVLNTLEDAVNDAPKAAEFLGRIFAKAITEDVVSLKEIGRLIHDGGEEPGRLLEIGLAADVLVSTLEVIKVEKGDAVLNEIRTSSNLRLETFRPPEPIKSRKLEKFI* 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1617 1815 MobiDBLite consensus disorder prediction 1411 1449 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 405 428 - -
Dod01g1617 1815 SUPERFAMILY ARM repeat 1180 1408 IPR016024 -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 364 428 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 220 255 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 1275 1304 - -
Dod01g1617 1815 SMART ma3_7 1628 1742 IPR003891 -
Dod01g1617 1815 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 134 1805 - -
Dod01g1617 1815 Pfam MA3 domain 1628 1741 IPR003891 -
Dod01g1617 1815 SUPERFAMILY ARM repeat 1623 1810 IPR016024 -
Dod01g1617 1815 Gene3D - 1184 1419 - -
Dod01g1617 1815 SMART if4_15 1184 1406 IPR003890 GO:0003723|GO:0005515
Dod01g1617 1815 MobiDBLite consensus disorder prediction 767 803 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 772 789 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 1 155 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 17 33 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 44 143 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 619 633 - -
Dod01g1617 1815 Gene3D - 1620 1815 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 916 936 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 381 397 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 199 255 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 615 640 - -
Dod01g1617 1815 Pfam MIF4G domain 1184 1406 IPR003890 GO:0003723|GO:0005515
Dod01g1617 1815 MobiDBLite consensus disorder prediction 1035 1063 - -
Dod01g1617 1815 Coils Coil 1266 1286 - -
Dod01g1617 1815 MobiDBLite consensus disorder prediction 1411 1430 - -
Dod01g1617 1815 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 134 1805 IPR045208 GO:0003743
Dod01g1617 1815 ProSiteProfiles MI domain profile. 1627 1751 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1617 Dod-Chr1 46680219 46689444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1617 1 1814 Eukaryotic Initiation Factors Gene Family AT3G60240 45.746 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1617 K03260 - gmx:100796636 2411.72