Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1602 ATGTATAGAATAATATCCACGCCGGCGTCCAAGTTCCGGCACTTCCGGCGACTCCGCTCTAGACCCACCGCCGCGGCGACCGACGAGGAACACGCCTTCCAAATCCTATGGCGCTACCAGATCCTAGACCCGGACAGCGACATCGTTGCTTATTGGAACAAGGTGTTCCTCGTGGCCAGCCTCCTCGCACTCTTCGTGGACCCTCTCTACTTCTTCCTCCCCACCGTGGGTGGGCCCGCTTGCCTGCAGGCAGACCCCAGGCTCAGCATCCTCGTCACCATCCTGCGCTCCTTCGCCGACCTCTTCTACCTCCTCCACATGGTCATGAAGTTCCGCACCGCCTTCGTCGCCCCCAACTCTAGAATCATCGGCCGCGGCGAGCTCGTCATGGATCCGCGGGAGATCGCTATGCGCTACTTGAAGTCCGATTTTTTCATTGACCTTGCCGCCACCATTCCACTGCCTCAGGCATGTAAGGGTATTGTGATTTGGTTAGTGATTCCAGCGAGTAGTAGCGCAAGAACTGATCATGCGAACAACACTCTTGCGCTTTTTGTTCTAATTCAGTACATTCCAAGGCTGTTTCTTATCTTCCCTTTGAACCAGCGTATTCAGAAAACCACTGGTGTTATCGCCAAGACTCCCTGGATTGGAGCGGCGTACAATCTTCTTCTCTACATGCTAGCTAGTCATGTTACGGGAGCAACTTGGTATCTATCGTCTATCGGGAGACAATTTAACTGCTGGAAAACAGAATGCGGACTGGAAAATGGATCACAAGCCCTGTCTTGCCTGCCAAGCTTTCTCGATTGTAACAGTGAGAATCTCCCTGAAAGGCAGTATTGGCTAAATATCACCAAAGTTATTAGCAAATGCGATGCAAAGACCAAGATCAACGTCAAATATAAGTTTGGGATGTTTGCTGATGCTTTCGTGAACGACGTCGTTACTTCCAGCTTTACGGAAAGATACTTCTATTCTCTTTGGTGGGGTTTAAGAAATTTAAGCTCATATGGACAGAATTTGGACACAACGACATACCTGCTGGAGACACTATTTTGCATTATCTTGTGCATTGCTGGATTAGTTCTCTGTTCACTTTTGATTGGAAACATGCAGACGTACTTGCAATCGATGTCGGTTAGACTTGAAGAATGGAGGGTTAGGAAAAATGATACTGAGGAGTGGATGAGGCACCGCCAGTTACCTCAAGATTTGCAGGAACGTGTCCGTCGCTTTGTTCAATATAAATGGCTGGCAACAAGAGGAGTCAATGAAGAATCCATACTGCTTTCGTTACCTGTGGATCTCCGTCGTGAAATTCAGCATCACTTGTGCCTTTCTCTTGTTCGGCGTGTCCCTTTCTTCTCACAAATGGACGCCCAGCTCCTTGATGCCATCTGTGAACGCCTTGTGTCATCATTAAGTACACAAGGCACTTACATTTTCCGCGAGGGTGATCCAGTAGATGAAATGCTGTTCATCATTAGAGGCCAATTGGAGAGCTCCACAACCAACGGAGGAAGGTCTGGGTTCTACAATTCCATCACACTCAGGCCTGGTGACTTTTGTGGAGAGGAATTGCTGACATGGGCCTTGATGCCAAACTCCACCCTCAACCTGCCTTCTTCTACTCGCACTGTCAAAGCTCTTTCCGAAGTTGAAGCTTTTGCACTGCAGGCAGAGGATCTGAAATTCGTGGCGAGTCAGTTCAAGCGCCTTCACAGCATGAAACTTCAGCACGCGTTCAGGTACTATTCCCATCAATGGAGGACATGGGGGTCTTGCTTCATACAAGCTGCCTGGAGAAAGCATCAGAAAAGGAAAGCAACAAGGGAGTTATCCATGAAAGAAGGGCTCTACTACATGGCAGTGCCTGAGAGAGCTAGTAGCTATTATCACAACGAAAGGGATGGAAGTGGAAGTTATGAGGATGAGATCGGGGGATCATCAGGGGATTCGAAAAGGGTTCAAAATCTTAGTGCAACTGTGTTGGCATCGAAGTTTGCTGCCAATACAAAGAAAGGTAATATTCAAAGCAGTGATCCTGTGCCCCAGTTGTTCAAGCCAGATGAACCTGACTTCTCTTTAGACCATGATGAGGAAGTTTA 2111 0.4837 MYRIISTPASKFRHFRRLRSRPTAAATDEEHAFQILWRYQILDPDSDIVAYWNKVFLVASLLALFVDPLYFFLPTVGGPACLQADPRLSILVTILRSFADLFYLLHMVMKFRTAFVAPNSRIIGRGELVMDPREIAMRYLKSDFFIDLAATIPLPQACKGIVIWLVIPASSSARTDHANNTLALFVLIQYIPRLFLIFPLNQRIQKTTGVIAKTPWIGAAYNLLLYMLASHVTGATWYLSSIGRQFNCWKTECGLENGSQALSCLPSFLDCNSENLPERQYWLNITKVISKCDAKTKINVKYKFGMFADAFVNDVVTSSFTERYFYSLWWGLRNLSSYGQNLDTTTYLLETLFCIILCIAGLVLCSLLIGNMQTYLQSMSVRLEEWRVRKNDTEEWMRHRQLPQDLQERVRRFVQYKWLATRGVNEESILLSLPVDLRREIQHHLCLSLVRRVPFFSQMDAQLLDAICERLVSSLSTQGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFYNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFALQAEDLKFVASQFKRLHSMKLQHAFRYYSHQWRTWGSCFIQAAWRKHQKRKATRELSMKEGLYYMAVPERASSYYHNERDGSGSYEDEIGGSSGDSKRVQNLSATVLASKFAANTKKGNIQSSDPVPQLFKPDEPDFSLDHDEEV 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1602 703 SUPERFAMILY Voltage-gated potassium channels 43 377 - -
Dod01g1602 703 MobiDBLite consensus disorder prediction 675 703 - -
Dod01g1602 703 Gene3D - 57 378 - -
Dod01g1602 703 SMART cnmp_10 455 586 IPR000595 -
Dod01g1602 703 Gene3D Helix hairpin bin 379 446 - -
Dod01g1602 703 ProSiteProfiles cAMP/cGMP binding motif profile. 455 565 IPR000595 -
Dod01g1602 703 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 30 697 - -
Dod01g1602 703 Pfam Ion transport protein 51 382 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod01g1602 703 MobiDBLite consensus disorder prediction 635 655 - -
Dod01g1602 703 CDD CAP_ED 455 586 IPR000595 -
Dod01g1602 703 Gene3D Jelly Rolls 453 573 IPR014710 -
Dod01g1602 703 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 30 697 - -
Dod01g1602 703 Pfam Cyclic nucleotide-binding domain 478 566 IPR000595 -
Dod01g1602 703 SUPERFAMILY cAMP-binding domain-like 385 577 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1602 Dod-Chr1 45900784 45904818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1602 18 701 Ion Channels AT5G14870 67.660 0.0 977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1602 K05391 - gmx:100802812 1228.39