Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1599 ATGGAGAAAATGGAATCCATTGCAAGACAAAAAACAGTTGAAATTGAAGAAACTGTGGAGAATGGGGTTCTCCCGGTGAGACTCGGTAAATTCAGAAGGCTGGACGTGGAGGGAGAGCAGAATGGAGGAGGAGAGGCTAGTAGCAGTAATTTGGATGCTAGAAGATGTTACTCAATGGGATCTTACCAGTATGTGCTTGGCAAATCGGACCTACGGATAACCTTGAACCATGATTGTCACGATGCAAAGCTCGCCAAAGGAGCAGAAAACTTGGAGGAGGCCTCAATTGAGGGGGATATGGAAGCAAAGAAGATTACAAGTGTCGGTAAAGGTGAGAGCTATTCTGTTTCCAAAATCTGGCTGTGGTCAAAGAAGGGAAAATTTTCAGTTTCATCGGATGCCCAAATGGGCTTACCGTCTTCTCTTAAATCAGACTTGCCTTGGATGAGGGAAACGGAAGGGACTTGA 468 0.453 MEKMESIARQKTVEIEETVENGVLPVRLGKFRRLDVEGEQNGGGEASSSNLDARRCYSMGSYQYVLGKSDLRITLNHDCHDAKLAKGAENLEEASIEGDMEAKKITSVGKGESYSVSKIWLWSKKGKFSVSSDAQMGLPSSLKSDLPWMRETEGT* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1599 155 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 8 140 - -
Dod01g1599 155 MobiDBLite consensus disorder prediction 131 155 - -
Dod01g1599 155 PANTHER BNAC06G12870D PROTEIN 8 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1599 Dod-Chr1 45769586 45772238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1599 24 127 C3H Transcription Factor Family AT2G18650 38.053 3.39e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1599 - - cit:102630819 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1599 01 45769586 45772238 Dod01g1599 01 45769586 45772238 ECH