Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1598 ATGACTAATTGTGTGGAGGATGAGGTCAAGAGAACAATGATACAGTTTCTAGCACAACTCTCTGGTAATGATGGCCAACAGAATTCAACTTTGGACTGGAAACAAGATTCTGATCCCTGCAAGGACCTCTGGCTAGGTGTACAGTGTGATGCTCGAAATATGTCCGTAAAGAAGTTGCAGCTAGACAGGCTCAATTTGAATGGAACTCTTGATGCTGCTATGCTTTGCAACTTGAAGCCCCTGGCTGCATCTATCACCTTTCTTGGTCTTGATGGCAACAATGTTGGTGGAAGAATAGCAGCTGAGATTGGAAACTGCAAACAACTCACTCGCCTACACGTAAGCGGAAACCAACTCACCGGAAACCTTCCCAGTTCACTTGCCATGTTAAGTAACTTAAAAAGGCTTGACATTTCGAACAACAATTTTTCGGGACCCTTGCCAGACTTGGCTAGAATCTCAGGGCTGAACATGTTCCTGGCACAAAACAATCAGCTCAGTGGAGAAATACCACCATTTGATTTCTCCAATTTCGACCAATTCAATGTCTCATTTAACAATTTCAGTGGCGCCATTCCAGATGTACATGGCCATTTCCTTGCAGACAGCTTCCTTGGTAACCCTCAACTCTGCGGAGATCCACTACCAAAAAGATGCTTTGGTTTGTCTGTGACTGCTAGTGAGAATTCAGAAGATACAAAGGGATCAACCAATCATTCCAAAGAGCAGATTCTCATGTATTTAGGCTATGCTGTGTTGGGCGCTGTCGTTGTCCTCTTCATAGCCTTAAAGTTGTGTAAGAGAAATAAGAAGGAAAAGAAAATTGAAGCATTGAATGAGAGAGTGGCAACTGATGGTGGTACTGAAAAGGTTAGCACTGTTTCAAGTGAATACAAAGCTGGGGTAAGCAGATCTGACTTTTCAATAACTTCTGATAGCGGGATGGTTTCGCAATCACTTATAGTTCTTTCGAGGCCAGCGGTGAATGAATTGAAATTGGAGGACCTGTTGAGGGCTCCTGCTGAATTGATTGGCAGAGGAGAGAATGGAAGCCTTTATAAGGTGATGCTTGACAATGGGATAATGGTGGTTGTAAAAAGGATCAAGGATTGGACCATTTCAAGCCATGACTTCAAGCAAAGAATGCAAATTTTGAGTCAAGTAAAGAACCCTTACGTACTATCACCTCTTGCCTTCTATTGTTCCAAGCAAGAGAAGCTTTTGGTCTATGAATATCAGGAGAATGGAAGTTTATTCAAACTCCTACATGGTACTCCAAAAGCCCTTGACTGGACCAGCAGACTTGGGATTGCAGCTGCCACTGCTGAGGCATTAGCTTTCATGCATCAAGAGCTTGGCCAATATGGAATTGTACATGGCAACCTGAAATCTTCAAACATCTTGCTAAACAAGAACATGGAGCCATCTGTAAGTGAGTATGGTGTAATGGGTGGGGATGATCAACAGAGTTCACCTTTTGCAAGTCCTTCTGCTGCTGATGCATCAGATGCCTTTAAGGGAGATGTTTATGGTTTTGGTGTCATTCTTCTTGAACTACTTACTGGAAAGTTGGTGAAAAGTGATGGGACTGACTTGACTGAGTGGGTTCAGTCAGTTGTAAGGGAAGAGTGGACTGGTGAAGTGTTTGACAAGGCTCTAATATCAGAGTATGCAAGCGAAGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAGGTGTGTTAATCGTTCCCCAGAGGCCAGGCCCAGTATGAACCAAATTGCTCTAATGATTAACACTATAAAGGAGGAAGAAGAAAAATCCTTGGTCTATGAAGTGTGA 1821 0.4305 MTNCVEDEVKRTMIQFLAQLSGNDGQQNSTLDWKQDSDPCKDLWLGVQCDARNMSVKKLQLDRLNLNGTLDAAMLCNLKPLAASITFLGLDGNNVGGRIAAEIGNCKQLTRLHVSGNQLTGNLPSSLAMLSNLKRLDISNNNFSGPLPDLARISGLNMFLAQNNQLSGEIPPFDFSNFDQFNVSFNNFSGAIPDVHGHFLADSFLGNPQLCGDPLPKRCFGLSVTASENSEDTKGSTNHSKEQILMYLGYAVLGAVVVLFIALKLCKRNKKEKKIEALNERVATDGGTEKVSTVSSEYKAGVSRSDFSITSDSGMVSQSLIVLSRPAVNELKLEDLLRAPAELIGRGENGSLYKVMLDNGIMVVVKRIKDWTISSHDFKQRMQILSQVKNPYVLSPLAFYCSKQEKLLVYEYQENGSLFKLLHGTPKALDWTSRLGIAAATAEALAFMHQELGQYGIVHGNLKSSNILLNKNMEPSVSEYGVMGGDDQQSSPFASPSAADASDAFKGDVYGFGVILLELLTGKLVKSDGTDLTEWVQSVVREEWTGEVFDKALISEYASEERMVNLLQVAIRCVNRSPEARPSMNQIALMINTIKEEEEKSLVYEV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1598 606 Gene3D Phosphorylase Kinase; domain 1 310 412 - -
Dod01g1598 606 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Dod01g1598 606 Gene3D Ribonuclease Inhibitor 79 152 IPR032675 -
Dod01g1598 606 Pfam Protein kinase domain 342 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1598 606 SUPERFAMILY L domain-like 33 198 - -
Dod01g1598 606 Gene3D Ribonuclease Inhibitor 7 78 IPR032675 -
Dod01g1598 606 ProSiteProfiles Protein kinase domain profile. 338 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1598 606 Gene3D Transferase(Phosphotransferase) domain 1 414 605 - -
Dod01g1598 606 PANTHER OS05G0588300 PROTEIN 3 605 - -
Dod01g1598 606 Pfam Leucine Rich repeats (2 copies) 107 151 IPR025875 -
Dod01g1598 606 SUPERFAMILY Protein kinase-like (PK-like) 342 590 IPR011009 -
Dod01g1598 606 Pfam Leucine rich repeat N-terminal domain 12 50 IPR013210 -
Dod01g1598 606 Coils Coil 261 281 - -
Dod01g1598 606 PANTHER OS10G0387400 PROTEIN 3 605 - -
Dod01g1598 606 Gene3D Ribonuclease Inhibitor 153 221 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1598 Dod-Chr1 45616557 45618750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1598 25 595 Receptor kinase-like Gene Family AT1G68400 35.285 3.31e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod01g1598 Pkinase 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1598 - - gmx:100813796 877.856