Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1596 ATGGCAGGGAGGCATTGTTACAAGGACGTGCTTCCATTCTCTGCAATGGTTGCAGTGGAGTGTACCAACGTCGGTGTCAACGTTCTATTCAAAGAAGCTACTAAGAAAGGGTTGAGTTACAATGCATTCATCGTTTATTCATACGCGGCCTCCACTCTATTCCTTCTTTTGCCTCTGCCCTTCATCTTCCGATGGTCAAGAGGGCTTCCTCCGTTCAAGTTGTCTCTAATCTTCAGAATTTTGCTCCTTGGTTTGATTGGATTTGTGGCTCAGGTTTCAGGATACAAAGGACTTCAATACACTTCACCGACTCTCTTTTCTGCTCTTAGCAACCTTATACCAGCTTTTACCTTCATGCTTGCAATCTTTTTCAGAATGGAAAAAGTTTTTATAAGAAGCTCAAGCACTCAGGCCAAAATCTTGGGTTCTATAGTATCGATATTAGGGGCACTCATAGTTGTTCTCTACAAGGGCCCTACATTGTTATCAACTTCGTCACCCATACAATCACCTTATATTGATTCTCCAATGGACTCATCATCCCAACAGAATTGGATTCTTGGTGGATTTCTACTTGCCATTGAGTTTCTTCTGGTTCCCATTTGGTACATTGTTCAGACCAATGTGATCAAAGAATTTCCAGCAGAGGCTATTGTGGTCTTCTTTTACAACCTCTGCGGGACTCTCATATCTGCGCCAGTATGCTTACTACTAGAAGAATCAAACTTGAGCGCTTGGAAGATAAATCTTGACATAACGTTGATCGCCATTATATACTCTGGATTCTTTTGCACAGGCCTAAGCAGCTTGGTTCACACTTGGGGTCTCCGTATTAAAGGCCCAGTGTATATATCAAGCTTTAAGCCTCTGTCAATAGCCATTGCAGCCGCTATGAGTGCTATATTTCTTGGTGATCCACTGTATTTGGGAACTGTTGTTGGAGCAGTAATACTATCAATTGGGTTTTATGCTGTTATACTGGGGCAAAGCGATAGAAGAACTAAGTAA 1008 0.4206 MAGRHCYKDVLPFSAMVAVECTNVGVNVLFKEATKKGLSYNAFIVYSYAASTLFLLLPLPFIFRWSRGLPPFKLSLIFRILLLGLIGFVAQVSGYKGLQYTSPTLFSALSNLIPAFTFMLAIFFRMEKVFIRSSSTQAKILGSIVSILGALIVVLYKGPTLLSTSSPIQSPYIDSPMDSSSQQNWILGGFLLAIEFLLVPIWYIVQTNVIKEFPAEAIVVFFYNLCGTLISAPVCLLLEESNLSAWKINLDITLIAIIYSGFFCTGLSSLVHTWGLRIKGPVYISSFKPLSIAIAAAMSAIFLGDPLYLGTVVGAVILSIGFYAVILGQSDRRTK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1596 335 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Dod01g1596 335 PANTHER WAT1-RELATED PROTEIN 10 331 IPR030184 GO:0016021|GO:0022857
Dod01g1596 335 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Dod01g1596 335 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Dod01g1596 335 PANTHER WAT1-RELATED PROTEIN 10 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1596 Dod-Chr1 45430587 45439954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1596 1 334 Nodulin-like Gene Family AT5G40240 57.143 1.05e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1596 - - gmx:100805667 487.648