Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1592 ATGACCAGGCCTTGGAGGTTTTGTTATAAGGAAGTGGCTCCATTTATTGCATTGGTGACTGTGCAGTTTACTGAGGTTGGCGTGAACATTCTATTCAAGGAAGCCACTGCGAAGGGTTTGAGTTACTATGCGTTCATTTTCTATTCCTTTGCTCTCTCCAATCTTGTTCTGCTTATCCCTTTGCCCTTCATCATCCGCAGGTCAATTGGGCTTTCCTCGCTCAATTTTTCTCTCCTCTGCAAAATTTTCTCCCTAGGATTGCTTGCGTTTTCAGCTCAGCTATGTGGATATAAAGGAATTGAGTACAGTTCGCCAAGTCTTGCTTCTGCTGCGAGCAACCTCCTTCCCGCTTTTATCTTCATATTTGCTGTCCTTTTCAAGATGGAAAAAATAGCTTTAAGAAGTTCAAGCACTCAAGCCAAAATCTTGGGTTCAATAGCATCAATAGGAGGTGCTCTCATAGTTGTTCTCTACAAAGGACCGATAATTTTTAATTATGCATCTCCATCACTGCCCCCCTCACTGAATACTCAGCTTGACTCTTCACAAAGGAATTGGATACTAGGTGGCGTCCTACTGACTGTGGCATATCTTCTAATGTCGATCTTGTATATTGTGCTGACCCATGTCATCAAATTGTATCCAGCAGAGCTGATTGTGGTTTTCTTATTCAACTTGTTCGGGACTATCGTAGCTGCCCCGGTATGTTTTCTAGCAGAACGAAACTTCAGTTTTTGGAGACTACAAGCTGATGTAACACTGGTGGCTGTTATATACTCGGCATTCTTTAGCACATTCTTCAGCACTGTTGTTCACACTTGGGGTGTCCATGTGAAAGGTCCTGTATATGTATCCATTTTTAAGCCCTTGTCAATCGCCATTGCTGCTGCTATGAGTATCATATTCCTTGGTGAAGCTTTGTATCTAGGAAGTGTTGTTGGAGCAGTGATACTGTCTGTTGGATTTTATTCTGTTATATGGGGTAAAGCTAAAGACGAGGAATTGCATGAGAACGAGAACCACTTAAATAACTCGGGATCCCAATCAAGCAGCAAGGTCCCTCTGTTGCAAGGTTTCGGCAAGGGTGAAGATATTTAA 1098 0.4253 MTRPWRFCYKEVAPFIALVTVQFTEVGVNILFKEATAKGLSYYAFIFYSFALSNLVLLIPLPFIIRRSIGLSSLNFSLLCKIFSLGLLAFSAQLCGYKGIEYSSPSLASAASNLLPAFIFIFAVLFKMEKIALRSSSTQAKILGSIASIGGALIVVLYKGPIIFNYASPSLPPSLNTQLDSSQRNWILGGVLLTVAYLLMSILYIVLTHVIKLYPAELIVVFLFNLFGTIVAAPVCFLAERNFSFWRLQADVTLVAVIYSAFFSTFFSTVVHTWGVHVKGPVYVSIFKPLSIAIAAAMSIIFLGEALYLGSVVGAVILSVGFYSVIWGKAKDEELHENENHLNNSGSQSSSKVPLLQGFGKGEDI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1592 365 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016021|GO:0022857
Dod01g1592 365 PANTHER WAT1-RELATED PROTEIN 12 335 - -
Dod01g1592 365 MobiDBLite consensus disorder prediction 339 365 - -
Dod01g1592 365 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020|GO:0016021
Dod01g1592 365 Pfam EamA-like transporter family 190 326 IPR000620 GO:0016020|GO:0016021
Dod01g1592 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 331 - -
Dod01g1592 365 MobiDBLite consensus disorder prediction 341 355 - -
Dod01g1592 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1592 Dod-Chr1 45308071 45310802 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1592 5 356 Nodulin-like Gene Family AT5G40240 52.113 1.78e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1592 - - gmx:100805667 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1592 01 45308071 45310802 Dod01g1592 01 45308071 45310802 ECH
Dod02g1486 02 17824537 17833539 Dod01g1592 01 45308071 45310802 ECH