Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1580 ATGGTTAAGGTCGCGAACTCGAGACTCGTTCTCGCAGCTATTCAGGAAGAAGGGTGCCATTGCTGTTCACAAGAAGACAATGCCAACATCAAGATAGACGGTGCCATCCACAAGGGCATGCCTCACAAGTTTTACTATGGTCACCCCGGACGCATATGGCATGTCAGCAAGCACAACATTGGCATTGAACTCAACAAGTCAAATCTTAGGCCAAATAATGTTTTGAAAGGATAA 234 0.4573 MVKVANSRLVLAAIQEEGCHCCSQEDNANIKIDGAIHKGMPHKFYYGHPGRIWHVSKHNIGIELNKSNLRPNNVLKG* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1580 77 PANTHER 60S RIBOSOMAL PROTEIN L21-1 25 67 - -
Dod01g1580 77 PANTHER 60S RIBOSOMAL PROTEIN L21 25 67 IPR001147 GO:0003735|GO:0005840|GO:0006412
Dod01g1580 77 Gene3D Ribosomal protein L21 12 75 IPR036948 GO:0003735|GO:0005840|GO:0006412
Dod01g1580 77 SUPERFAMILY Translation proteins SH3-like domain 26 69 IPR008991 -
Dod01g1580 77 Pfam Ribosomal protein L21e 22 67 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1580 Dod-Chr1 44900820 44901444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1580 26 67 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 59.524 2.52e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1580 K02889 - egr:104446219 69.707