Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1575 ATGTCTTGGCTTCTGTACCTCCTGCTTAAACTTGTAATCTTTCTCATCTATGCTTCTCCATCACTTCCCTCTATGACCGAGCTTGACACTCTCATGGCCATCAAAGAGTCTCTAGACCCAGAAAACCGCGTTTTGATATCATGGACTCCCTATTCTGACCCATGCAGTGGCACTTTTGAGGGCGTGGCTTGCAATGAGCAGGGCCATGTAACCAATATTTCATTGCAAGGGAAAGGTCTCTCCGGAAGGATACCAGCAGCAATGTCTGGTCTCAAGAGCTTGACGGGTCTGTATCTCCACTTCAATGCTCTGAATGGAATGTTACCAAAGGAGATTGCAGGCTTGACTGAGCTTAGTGATTTGTATCTAAACGTCAATAATATCTCTGGTCATATCCCTTGTGAGATTGGTAACATGTCAAATCTTCAAGTTTTGCAGCTTTGTTATAATGAGTTTACTGGGAGTATACCCACTGAACTGGGAAAGCTGAGGAAGCTTAGTGTTCTCGCACTACAATATAATCAATTAAATAGTGCGATTCCTGCAAGTTTGGGTGAATTGGAGACCCTAACTCGATTGGATTTAAGCTTCAATAGGCTTTTTGGTCCTATTCCAGTGATGTTGGCTAATGCACCAAAGCTGGAGAGTCTGGATGTTCGAAACAATTCTCTCTCAGGCAGTGTCCCTGATGCACTAGAGAGATTGAAAGATGGATTCCAGTACATGAACAACCCTAGTTTATGTGGGACTGGATTTGCCGATTTAGCTTCTTGTAAAGCAGTAAGCAGTTTCGACCCCACCAGACCTGAACCATATGTACCCAGTAATCTTTCAACAAAAGATCTTCCTGCAAGTGTCAAGCCAAATGCTAAAAGTTGTGGTGAGACTCACTGTAAAAAGCAATTAAAATCTTCAATAGTTGGCTTCGCTTTTGGCATAACTGGAGTTACTTTTGCCTCCACAATTTTTGGACTTTATATGCTCTTATGGTATCGTCTTCGGAAACAGAAAATTGGAAGCACTGCCAATATTTCTGATAGCCGGCTTAGGACTGACCAGACCAAGGAAGTATGCAAGAAAAATGCATCTCCTCTGATAAGTTTGGAGTACTCTAATGGATGGGATCCTTTAGCCAAAGGACATAGCGGATATTCCCAGGAATTTCTCGAGAGCTTCATGTTCAATCTTGAGGATGTAAAGCGTGCAACTCAGTGCTTCTCTGAGCTAAATTTATTGGGGAAGAGTAATTTTTCATCTATCTATAGGGGAGTCCTCAGAGATGGATCTATTGTGATCGTGAAATGCATTGCCAAGGCAAGCTGCAAGTCTGATGAAACTGAATTCTTGAAAGGGTTGAAGATATTGATCTCATTAAAGCATGAAAATCTAGTTCGGTTAAGAGGCTTTTGCATTTCAAAGGGCCGAGGCGAATGTCTTCTGATATATGATTTTACCCCAAATGGGAGTTTGTTACAGTATCTTGATGTTAAGAAAGGCAATGCTAAGGTTCTTGAATGGTCCACCAGAGTATTCATCATCCATGGCATTGCCAAAGGTATTGCTCATCTGCATGGAAAGAAAGCAAGCAAAAACGCTCTAGTTCACCAGAATATATCAGCTGAGACTGTGCTTCTAGATGCTCAGTATAATTCCGTAATTGCATATTCAGGATTGCACAAACTCCTTGCAGATGATGCCGTTTTCTCCACCCTCAAAGCTAGTGCAGCCATGGGATATTTGGCCCCAGAATACACAACAACTGGTCGTCTGACTGTAAAGAGTGATGTGTACGCTTTTGGAGTGATAGTTTTCCAGCTTCTTACTGGAAAACGTGATATCACTCAACTAAGTCGCCGACAACTAGAAACTGCTAGTCTCAAAGATATAGTTGATGAGAATCTTGAAGGAAAGTTCTCAGAATCAGAGGCCGGCATATTGAGGACAGTTGCTTTGCTTTGCATCCATGAATCTCCACAACTCCGACCTTTTATGGATGATGTCATTCAAGAACTAGATGACAAAGAGTAG 2028 0.4206 MSWLLYLLLKLVIFLIYASPSLPSMTELDTLMAIKESLDPENRVLISWTPYSDPCSGTFEGVACNEQGHVTNISLQGKGLSGRIPAAMSGLKSLTGLYLHFNALNGMLPKEIAGLTELSDLYLNVNNISGHIPCEIGNMSNLQVLQLCYNEFTGSIPTELGKLRKLSVLALQYNQLNSAIPASLGELETLTRLDLSFNRLFGPIPVMLANAPKLESLDVRNNSLSGSVPDALERLKDGFQYMNNPSLCGTGFADLASCKAVSSFDPTRPEPYVPSNLSTKDLPASVKPNAKSCGETHCKKQLKSSIVGFAFGITGVTFASTIFGLYMLLWYRLRKQKIGSTANISDSRLRTDQTKEVCKKNASPLISLEYSNGWDPLAKGHSGYSQEFLESFMFNLEDVKRATQCFSELNLLGKSNFSSIYRGVLRDGSIVIVKCIAKASCKSDETEFLKGLKILISLKHENLVRLRGFCISKGRGECLLIYDFTPNGSLLQYLDVKKGNAKVLEWSTRVFIIHGIAKGIAHLHGKKASKNALVHQNISAETVLLDAQYNSVIAYSGLHKLLADDAVFSTLKASAAMGYLAPEYTTTGRLTVKSDVYAFGVIVFQLLTGKRDITQLSRRQLETASLKDIVDENLEGKFSESEAGILRTVALLCIHESPQLRPFMDDVIQELDDKE* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1575 675 SUPERFAMILY Protein kinase-like (PK-like) 385 671 IPR011009 -
Dod01g1575 675 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 673 - -
Dod01g1575 675 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Dod01g1575 675 Gene3D Phosphorylase Kinase; domain 1 379 484 - -
Dod01g1575 675 Pfam Leucine rich repeat 69 128 IPR001611 GO:0005515
Dod01g1575 675 SMART serkin_6 406 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1575 675 CDD STKc_IRAK 412 672 - -
Dod01g1575 675 Gene3D Ribonuclease Inhibitor 24 287 IPR032675 -
Dod01g1575 675 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 673 - -
Dod01g1575 675 Pfam Protein tyrosine and serine/threonine kinase 410 671 IPR001245 GO:0004672|GO:0006468
Dod01g1575 675 Gene3D Transferase(Phosphotransferase) domain 1 485 675 - -
Dod01g1575 675 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Dod01g1575 675 SUPERFAMILY L domain-like 25 236 - -
Dod01g1575 675 ProSiteProfiles Protein kinase domain profile. 406 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1575 Dod-Chr1 44685873 44690314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1575 7 519 Miscellaneous Gene Families AT4G22730 51.040 9.98e-172 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dod01g1575 PK_Tyr_Ser-Thr 1.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1575 - - var:108327466 954.51