Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1574 ATGGGTTCTGTCAGCAACTCAAATCCATGGGCTCCAAATTCTGTTTTCAAAGACTGTTCCCAAGGAATTTGCAGCATCTATTGTCCCCAGTGGTGTTACATCGTCTACTCTCCTCCCCCTCCTTCAGTCATTCTCGGCGATGACGCAGATGATCACTCTTCAGGCTTTGAGTTCTCTCCTCTCATAGTGGCTGTTATTGGAATCTTAGCAAGTACTTTCATCTTGGTCACCTACTATACCGTTATCTCAAGGTTCTGCAGGCACAGAGGCAGATTCAATGATCCAGGCTCACAAACAGATCACGAGGTTAGTGATGCTATGAACAACGAATCGGCTCAAGTTTCTTCATCTTCTGGTTTGGATGAGGCTCAAATCAAATCCATCACTGTTTGCAAGTACGTCAAAGGTAGTGGGTTGGTTGAGGGTAGTGATTGTTCCGTGTGTTTGAGTGAATTCCAAGAGAACGAGAGCTTGAGATTATTGCCGAAATGCAACCACGCCTTTCATCTTCCTTGTATTGATACTTGGCTGAAATCCCATTCTAGTTGTCCTTTGTGCCGTTCCAATATCTCCTCCACCATCGATTCTTCCCCAAATCAAAGAGACACGGCAGTGATGGAAGCACCAGCAAGCGTCAATATCAATTCCTTGGAATATCAGCAAAGGAGTGATGTTGTAATTATTCAGAGTCCCCACCCAAGTTCACGGCAAGAAGTTGTGGTTGATTTGGGTGGTGAAGTACAAGAAAAGTGGCCAATGGAAGAGGCTAACGATGGACAGAATACGGAACAGACGGACAGGCACGAGTTGAATATGAATCAAAGAATGTCCGTTGCTGATATACTAGATCAGATTGATGCCGATGTGTAG 870 0.4483 MGSVSNSNPWAPNSVFKDCSQGICSIYCPQWCYIVYSPPPPSVILGDDADDHSSGFEFSPLIVAVIGILASTFILVTYYTVISRFCRHRGRFNDPGSQTDHEVSDAMNNESAQVSSSSGLDEAQIKSITVCKYVKGSGLVEGSDCSVCLSEFQENESLRLLPKCNHAFHLPCIDTWLKSHSSCPLCRSNISSTIDSSPNQRDTAVMEAPASVNINSLEYQQRSDVVIIQSPHPSSRQEVVVDLGGEVQEKWPMEEANDGQNTEQTDRHELNMNQRMSVADILDQIDADV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1574 289 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 196 IPR013083 -
Dod01g1574 289 CDD RING-H2_PA-TM-RING 144 187 - -
Dod01g1574 289 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 225 IPR044675 -
Dod01g1574 289 SUPERFAMILY RING/U-box 139 196 - -
Dod01g1574 289 Pfam Ring finger domain 144 187 IPR001841 -
Dod01g1574 289 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Dod01g1574 289 PANTHER E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE 3 225 - -
Dod01g1574 289 SMART ring_2 145 186 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1574 Dod-Chr1 44640571 44643206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1574 1 288 C3H Transcription Factor Family AT3G03550 46.154 4.46e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1574 - - adu:107495094 369.777