Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1573 ATGAGTTGCTTTTACTACTTCAAAGACAAATCCAGGAAGTGGAGACGAAAATCAGCACCTGAACTGGAAGAACAAGAGAAATCCACGTTTACAAGGATCGAAAGAGTCACCAAGTCTTCAGGCTCCTCGGCCTCTCCTCGCGGTATACCAGAATTGTATGAGGAGAGAGCTCATAATTTGCGGGTTTTCTCCTACGGTGAGCTCAGGCATGCCACATATGATTTCAGTAGGCTTTGTAAGATAGGAGAGGGTGGATTTGGGAGTGTGTACAAAGGTTCAATTAAACCTGTCAATGGGAATGGTGATCCTATTTTAGTTGCCATCAAAAAGCTTAACCAGAATGGATTGCAGGGTCATAAGCAATGGCTAGCTGAAGTTCAGTTTCTTGGTGTTGTTCAACACCAAAACCTAGTCAAACTCATTGGATACTGTGCTGTGGATGGAGAAAGAGGAATCCAAAGACTACTTGTATATGAATACATGTCAAATAAAAGCTTAGAATCTCATCTTTTCAATAAAGCCTATGATCCTCTTCCTTGGAAAACAAGACTTGAGATAGCACTGGGAGCAGCTCAAGGGTTAGCTTATCTGCATGAAGACTCGGAAGTACAGGTGATATATCGAGATTTCAAATGTTCAAATGTATTACTGGATGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGACCAGTAGCTGGGAATACTCATGTTTCAACTGCTGTGATGGGGACATATGGTTATGCTGCTCCAGATTATATTGAGACAGGCCATCTCACTGCCAAGAGTGATGTGTGGAGTTTTGGTGTGGTGCTTTATGAAATACTCACAGGACGGCGTTCAATGGAGAGAAACCGGCCCAAATCGGAGCAGAAACTTTTGGAATGGGTGAAACAATATCCTCCAGATACCAAAAGGTTTCTCTTGATTATGGATCCAAGACTTGAGGGCCAGTATTTGATTAATGGGGCACGAAAGCTTGCCAGGCTTGCAGATAATTGTCTTTGTAAGAGCGCAAAAGATCGACCAACAATGAGTCAAGTGGTAGAGATACTGAAGCAGATAATCCTCGCTTCTGATGATGAAGAATCAGCAGAGGAAAACATTGACATATCAGAAGATGATCCAGCTGAGCCTGAAGAAAAGCCGAACCAGAAAGCCCCTACAGAATTATGGAAAAAGAGGATGGCCCATCTTGCAAAACTTGGTGAGCATGTGGAGAGTGCTAGTAGAAGAAGATTTATGATCTTACAGAGAGCCAACGTTCCTTAA 1284 0.4252 MSCFYYFKDKSRKWRRKSAPELEEQEKSTFTRIERVTKSSGSSASPRGIPELYEERAHNLRVFSYGELRHATYDFSRLCKIGEGGFGSVYKGSIKPVNGNGDPILVAIKKLNQNGLQGHKQWLAEVQFLGVVQHQNLVKLIGYCAVDGERGIQRLLVYEYMSNKSLESHLFNKAYDPLPWKTRLEIALGAAQGLAYLHEDSEVQVIYRDFKCSNVLLDENFRPKLSDFGLAREGPVAGNTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEILTGRRSMERNRPKSEQKLLEWVKQYPPDTKRFLLIMDPRLEGQYLINGARKLARLADNCLCKSAKDRPTMSQVVEILKQIILASDDEESAEENIDISEDDPAEPEEKPNQKAPTELWKKRMAHLAKLGEHVESASRRRFMILQRANVP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1573 427 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Dod01g1573 427 CDD STKc_IRAK 81 359 - -
Dod01g1573 427 MobiDBLite consensus disorder prediction 366 395 - -
Dod01g1573 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dod01g1573 427 PANTHER OS01G0588500 PROTEIN-RELATED 22 415 - -
Dod01g1573 427 Gene3D Transferase(Phosphotransferase) domain 1 161 381 - -
Dod01g1573 427 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
Dod01g1573 427 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1573 427 Pfam Protein tyrosine and serine/threonine kinase 79 356 IPR001245 GO:0004672|GO:0006468
Dod01g1573 427 MobiDBLite consensus disorder prediction 366 381 - -
Dod01g1573 427 ProSitePatterns Protein kinases ATP-binding region signature. 81 110 IPR017441 GO:0005524
Dod01g1573 427 PANTHER OS07G0495150 PROTEIN 22 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1573 Dod-Chr1 44601786 44610786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1573 1 386 Glycoside Hydrolase AT3G07070 43.392 5.64e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod01g1573 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1573 - - gmx:100784625 680.248