Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1548 ATGTGGGGGTCAGGCTCACGGTCATCAGTTCGTGCCCCTGGTCTATGCACTTTCACATGCTTGTCAAGAAGGGGAGGACATGGATACTATAACCAAGGAGTATGGAACAGCGAAGGAATTGGGTTCTTGATGTGTGGATTGGGCGCACGTCAAGAGTCCAATTCCGAGCGAGAGCTTTTGATTGTTTTGGAAGTAATTTTCATTGCCTGTCAAGGGAGTGATTGGAGGGACAAGACTTGCTATAGAAAAGAAATGTATGCAAGCGAACCTCCATACCAGCTTCCTTTCCAGAATGCCCGGGCTTGTTTGAGGCTCAGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTAAGTGCAAATCCTGAGGCACCTCTAAATATTGAATGCTCAATGGATGAGAAGGATGTCAGGGGCTTCATCAAGTGTGATGAGTTTGAGCAACTAAGTCTTCCACTTTTGGAATGCGTGAAGGGACCTGTGGAGAAGGCACTTGCTGAAGCAGACCTTACCATTGAAAATGTACACACGGTTGAGGTGGTTGGATCAGGATCTCGCATACCAGCTATAAACAAAATATTGACAGAGTTTTTGAAAAAGGGAGCCTAG 603 0.466 MWGSGSRSSVRAPGLCTFTCLSRRGGHGYYNQGVWNSEGIGFLMCGLGARQESNSERELLIVLEVIFIACQGSDWRDKTCYRKEMYASEPPYQLPFQNARACLRLRAACEKLKKVLSANPEAPLNIECSMDEKDVRGFIKCDEFEQLSLPLLECVKGPVEKALAEADLTIENVHTVEVVGSGSRIPAINKILTEFLKKGA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1548 200 Pfam Hsp70 protein 97 198 IPR013126 GO:0005524|GO:0140662
Dod01g1548 200 SUPERFAMILY Actin-like ATPase domain 95 198 IPR043129 -
Dod01g1548 200 Gene3D Actin; Chain A, domain 4 97 154 - -
Dod01g1548 200 Gene3D - 155 198 - -
Dod01g1548 200 PANTHER HSC70CB, ISOFORM G-RELATED 96 198 - -
Dod01g1548 200 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 96 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1548 Dod-Chr1 42251283 42252632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1548 98 196 Calmodulin-binding Proteins AT1G16030 37.374 4.48e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1548 K09489 - gmx:100778196 179.874