Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1532 ATGGCTAATGCTTCCTTTGAGACTGAGTACTACACCCCAAACCACCAGAGACGATACTATCCAACGCCAGCGAGTAATCACAATGTGTCTCACGGCTCAGGCTCTAGTTTCACCCTGTCCAGCTCCAGAAGCAAAGCCAGCTCCAGAAGAGCTCGCCGCAGCAGAGTTCCTGCGACTCCTTTCGCTTCAGACGACGATCATTCATGGCAAGGCGAGCTTTCATGGAAGTTTGACGCCAGAGGGTGGAGCGAGTACAGCACAAACTTGGGCTCAGTTCTGAATCCATGGCCAGCCAGCTCCCCATCTGATCGCAGCCGTGTGTTTCGTCAGTCAGCCAATGACTATTTCCTTGCTCGAACAAGTGGCTTCAGAGGCCTCGCCAACTCACCTAATCACGAACATTCGGGCTATGGAAGAGTTGAGCTTCAGAGCTATGTAGCTAGGGACAGTGACCATAGTTACTTTGATCAGCACAGTGAGTCGTCTGGTGGGTTCTCAAAGTTGGGAATCATCAAAGACGGGAGCAGTGGAAAAGGTAGGAGCAGTCCACTAGCTGAGGAGGATGAGCTTAATCTGACAGATTATAGCATATCAGATGAACCTGTTGGGCACGATCCTGAATTATCATATATTAAAAATGATCATCGTGATTATGGTGCGCATTATGGAAGCCATGGTGGTTATGGTCACCATGACGTTGACACGATTTCAGGATATGATGAAGAAGGTGAGGATGATTTGGATGAGGAGGACGCAGGGCCTCCAAAGGCAGTTGGGTTGTTCAGCTTGTTTAGGTACGCAACCACGTGGGATTGGGTGCTCGTGTTTGTGGGTTGTGTAGGCGCTTTCATAAACGGAGGATCACTTCCTTGGTATTCTTATCTTTTCGGAAACTTGGTCAATAAGATTTCACGAGAATCATCAGACGGGGACAAAACCCAGATGGTGAAAGATGTAGAGAAGATATGCATATTTATGACCGGTTTAGCTGCAGTTGTGTTAGTTGGAGCATATTTGGAGATCACATGTTGGAGGTTAGTGGGGGAGCGATCTGCTCAGAGAATCAGAACAGAGTATTTAAGAGCAGTTCTTCGACAGGACATAAGTTTCTTTGATACGGAGATCAACACGGGTGATATTATGCATGGAATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGAGAAGATGGCTCACTTCGTTCATCATGTATTTACATTCATATGTGGCTACCTTGTCGGGTTTAGAAGGTCATGGAGAGTTTCTTTGGTGGTTTTCTCAGTCACTCCATTGACAATGCTCTGCGGCATGGTTTACAAGGCAGTCTATGGTGGTCTAACTGCAAAAGAAGAAGCTTCTTACAGGAAAGCTGGTAGCATTGCGGAGCAAGCTATCAGTTCAATTAGGACAGTGTTTTCGTTCGTTGCAGAAAGCCAACTGGCTATAAAATATGCTGAACTACTGCAAAAATCAGCTCCAATAGGGGCAAAAATTGGTTTTGCTAAGGGTGCGGGCATGGGTGTTATCTATTTAGTAACCTATTCAACATGGGCGTTAGCTTTCTGGTATGGTGCTATCTTAATTGCCAAGGGCGAACTTGACGGGGGTTCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGGGGAAGAGGCTTGGCACTGGCACTGTCATATTTTGCACAATTTGCACAAGGTACTGTTGCAGCAAGTCGAGTATTCTTTATTATTGACAGAATCCCTGAGATTGATCCCTATAGCCTCGAGGGAAGGAAGCTTTCTTCTGTTCGTGGAAGAATTGAGCTAAAAAATGTCAGTTTTGCATACCCATCTCGTCCTGATTCTCTGATACTTCATTCGCTTAGTTTAGTATTTCCGTCCTCGAAAACTTTGGCATTGGTTGGTGCCAGTGGAGGGGGCAAGTCCACTATTTTTGCTCTCATAGAGAGGCTTTATGACCCTATTGAAGGGATAATTACCTTGGACGGCCATGATTTGAGGACACTACAAGTTAAGTGGCTAAGAGGTCAGATTGGGATGGTTGGTCAAGAGCCAATTCTCTTTGCCACATCAATACTGGAAAACGTGATGATGGGGAAAGATAATGCCACGAAGGAAGAGGCAATTGCTGCTTGCATTGCAGCAGATGCTCACAACTTCATCTCTAAGCTACCACTAGGCTATGACACTCAGGCTGGAGACAGGGGTGCAAAACTCTCAGGAGGTCAAAAGCAGCGAATTGCACTAGCTCGAGCAATGATCAAAGATCCTAAAATTCTTCTTTTGGACGAACCTACTAGTGCTCTTGATGCTGAGTCAGAGTCTGCAGTCCAGCAGGCCATTGACAAGATTTCTGCTAACAGAACAACCGTTGTCATTGCTCACAGGATAGCAACAGTGAAAAATGCTCATGCAATTGTGGTTCTTGAAAATGGTACTGTCACTGAGATTGGTGACCATCGCCAGCTTATGGGGAAAGCTGGAACCTACTATAACCTTGTCAAGCTTGCTACCGAAGCCATTTCACAACCTTTCTCTGTAGAAAATGGCATGCAAAAGGCCAATGATCTTTCCACCTATTATAAATCTTCTAATGATGTATCATCAAGATATGCAGTAGATATCACAACGCCTAAATACTTCAAATCTGCACAGGAGGAAAAACAAACAGAGATGGAAGATGAGCCAAGTAGAAAGCCAAGAAAATTCAGACTTTCTGAGATACTGAAATTGCAAAGACCAGAGCTTTGGATGCTAATTTTAGGATTCTTCTTGGGCATGTCTGCGGGCGCTTTTCTGTCCCTCTTTCCGTTGGTTTTAGGCATATCTCTTGCAGTATATTTTGATGATGACCATCATAGGATGAAAATAGATGTTGGGCACCTTTGTTTAGCACTTGTAGGCCTTGGATTTGGTTGTATACTTTCCATGACTGGACAACAAGGTTTTTGTGGTTGGGCTGGAGCAAAGCTAACACTAAGGGTTAGAGACCTCTTGTTCCAATCCATCTTGAAACAAGAACCTGGGTGGTTTGATTTTGATGAAAACTCAACTGGCGTGCTTGTGTCAAGGCTCTCAATAGACTGTGTCAGTTTTCGTTCAGTACTTGGTGACCGATTCTCAGTCCTTCTTATGGGTTTGAGTTCAGCCGCTGTTGGCCTTGGTGTCTCCTTTTACCTCAATTGGAGGCTAACCCTTTTGGCAGCTGCTGTAACCCCCTTCACTCTTGGTGCAAGCTACATAAGCTTGCTCATAAACATTGGGCCACGGGTTGATAATAACACTTATACGAGAGCTAGCAACATTGCTTCTGGGGCAGTGTCAAACATAAGGACAGTTACTACGTTTTCTGCCCAGGAACAGATAGTGAATTCTTTTGATCGAGCACTGTCAGAACCTAGCAGAAGATCATTAAAAAGTTCACAAATCCAAGGTCTAACATTTGGATTCTTTCAAGGTGCTATGTACGGAGCATACACCTTAACTCTCTGGTTTGGAGCCAAGCTAGTAGAAGACAACAAAGCAAAATTTGGTGATGTGAATAAGATTTTTCTCATTCTTGTGTTGAGCTCATTTTCGGTGGGGCAACTAGCTGGTTTAGCACCAGATACTTCGATGGCGGCTACAGCAATCCCTGCTGTTCAAGATATCATAAATCGTAGGCCACTAATAGGAAACGATAAAACAAAAGGCAGGAAAGTAGATCCATCGAAGTCATTCAAAATCGATTTCAAAATGGTGAGTTTTGCATACCCATCTAGGCCTGGGGTGATTGTCTTGAGGGATTTCTCTTTGAAGATCAAAGGTGGAAGCACAGTGGCCCTAGTGGGACCAAGTGGATCAGGAAAGTCAACGGTCATATGGTTGACGCAGAGGTTCTATGATCCAGACCAAGGAAAGGTGATGCTGGATGGGGTAGATGTGAAGGACATTGACGTGAAGTCGTTGAGGAGGCAAATAGCTTTGGTGGGTCAAGAACCGGCACTGTTTGCTGCGAGTATAAGGGAGAATATTGCCTTTGGGGACCCAAATGCGGCATGGGCTGAAATCGAAGCTGCTGCAAAGGAGGCATTCATCCATAAATTCATCAGCGGCCTTCCTCAAGGCTATGAAACCCAGGTTGGTGAAAGTGGGGTCCAGTTATCAGGTGGCCAGAAACAAAGAATTGCAATAGCCAGGGCCATATTGAAGAAATCAAGGGTTCTTCTGCTTGATGAAGCTAGCAGTGCCTTGGACTTGGAATCAGAGAAACACGTACAGGATGCCCTTAAAAAAGTTTCCAAAGAGGCAACAACCATAATTGTAGCTCACCGTCTTTCCACAATCAAAGAAGCTGACAGGATAGCAGTTATGAAAGATGGAGCAGTGGTGGAGTATGGGAGCCATGACACTCTGATGGCTTCCCAAGAAGATGGCTTGTATGCTAGCCTAGTTCGTGCTGAGGCCGAAGCGAATGTTTTTGCTTGA 4470 0.4499 MANASFETEYYTPNHQRRYYPTPASNHNVSHGSGSSFTLSSSRSKASSRRARRSRVPATPFASDDDHSWQGELSWKFDARGWSEYSTNLGSVLNPWPASSPSDRSRVFRQSANDYFLARTSGFRGLANSPNHEHSGYGRVELQSYVARDSDHSYFDQHSESSGGFSKLGIIKDGSSGKGRSSPLAEEDELNLTDYSISDEPVGHDPELSYIKNDHRDYGAHYGSHGGYGHHDVDTISGYDEEGEDDLDEEDAGPPKAVGLFSLFRYATTWDWVLVFVGCVGAFINGGSLPWYSYLFGNLVNKISRESSDGDKTQMVKDVEKICIFMTGLAAVVLVGAYLEITCWRLVGERSAQRIRTEYLRAVLRQDISFFDTEINTGDIMHGIASDVAQIQEVMGEKMAHFVHHVFTFICGYLVGFRRSWRVSLVVFSVTPLTMLCGMVYKAVYGGLTAKEEASYRKAGSIAEQAISSIRTVFSFVAESQLAIKYAELLQKSAPIGAKIGFAKGAGMGVIYLVTYSTWALAFWYGAILIAKGELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFFIIDRIPEIDPYSLEGRKLSSVRGRIELKNVSFAYPSRPDSLILHSLSLVFPSSKTLALVGASGGGKSTIFALIERLYDPIEGIITLDGHDLRTLQVKWLRGQIGMVGQEPILFATSILENVMMGKDNATKEEAIAACIAADAHNFISKLPLGYDTQAGDRGAKLSGGQKQRIALARAMIKDPKILLLDEPTSALDAESESAVQQAIDKISANRTTVVIAHRIATVKNAHAIVVLENGTVTEIGDHRQLMGKAGTYYNLVKLATEAISQPFSVENGMQKANDLSTYYKSSNDVSSRYAVDITTPKYFKSAQEEKQTEMEDEPSRKPRKFRLSEILKLQRPELWMLILGFFLGMSAGAFLSLFPLVLGISLAVYFDDDHHRMKIDVGHLCLALVGLGFGCILSMTGQQGFCGWAGAKLTLRVRDLLFQSILKQEPGWFDFDENSTGVLVSRLSIDCVSFRSVLGDRFSVLLMGLSSAAVGLGVSFYLNWRLTLLAAAVTPFTLGASYISLLINIGPRVDNNTYTRASNIASGAVSNIRTVTTFSAQEQIVNSFDRALSEPSRRSLKSSQIQGLTFGFFQGAMYGAYTLTLWFGAKLVEDNKAKFGDVNKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVQDIINRRPLIGNDKTKGRKVDPSKSFKIDFKMVSFAYPSRPGVIVLRDFSLKIKGGSTVALVGPSGSGKSTVIWLTQRFYDPDQGKVMLDGVDVKDIDVKSLRRQIALVGQEPALFAASIRENIAFGDPNAAWAEIEAAAKEAFIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSRVLLLDEASSALDLESEKHVQDALKKVSKEATTIIVAHRLSTIKEADRIAVMKDGAVVEYGSHDTLMASQEDGLYASLVRAEAEANVFA* 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1532 1489 PANTHER ABC TRANSPORTER B FAMILY 237 1486 - -
Dod01g1532 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 837 IPR027417 -
Dod01g1532 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1243 1479 IPR003439 GO:0005524
Dod01g1532 1489 Pfam ABC transporter transmembrane region 275 548 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g1532 1489 Pfam ABC transporter transmembrane region 920 1189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g1532 1489 Pfam ABC transporter 619 768 IPR003439 GO:0005524
Dod01g1532 1489 Gene3D ABC transporter type 1, transmembrane domain 1209 1485 IPR036640 GO:0005524|GO:0016021
Dod01g1532 1489 Pfam ABC transporter 1261 1409 IPR003439 GO:0005524
Dod01g1532 1489 Gene3D - 1232 1483 IPR027417 -
Dod01g1532 1489 Gene3D - 591 839 IPR027417 -
Dod01g1532 1489 PANTHER - 237 1486 - -
Dod01g1532 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 276 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g1532 1489 Gene3D ABC transporter type 1, transmembrane domain 262 1208 IPR036640 GO:0005524|GO:0016021
Dod01g1532 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1480 IPR027417 -
Dod01g1532 1489 MobiDBLite consensus disorder prediction 174 210 - -
Dod01g1532 1489 SUPERFAMILY ABC transporter transmembrane region 262 585 IPR036640 GO:0005524|GO:0016021
Dod01g1532 1489 SUPERFAMILY ABC transporter transmembrane region 909 1223 IPR036640 GO:0005524|GO:0016021
Dod01g1532 1489 CDD ABC_MTABC3_MDL1_MDL2 601 838 - -
Dod01g1532 1489 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1207 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod01g1532 1489 MobiDBLite consensus disorder prediction 18 45 - -
Dod01g1532 1489 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524
Dod01g1532 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 601 837 IPR003439 GO:0005524
Dod01g1532 1489 SMART AAA_5 1270 1456 IPR003593 -
Dod01g1532 1489 SMART AAA_5 628 829 IPR003593 -
Dod01g1532 1489 CDD ABC_6TM_Pgp_ABCB1_D1_like 276 574 - -
Dod01g1532 1489 MobiDBLite consensus disorder prediction 1 68 - -
Dod01g1532 1489 CDD ABC_MTABC3_MDL1_MDL2 1243 1481 - -
Dod01g1532 1489 CDD ABC_6TM_Pgp_ABCB1_D2_like 910 1225 - -
Dod01g1532 1489 ProSitePatterns ABC transporters family signature. 1382 1396 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1532 Dod-Chr1 39928828 39938215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1532 987 1486 Calmodulin-binding Proteins AT2G36910 38.845 1.50e-99 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1532 K05658 - gmx:100816700 2260.72